New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2497909 =	32 (0.590)	4 (0.080)	4/238	NT	8.6%	intergenic (+10/‑191)	PP_2192/PP_2193	ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor
	?	NC_002947	2498007 =	56 (1.130)					intergenic (+108/‑93)	PP_2192/PP_2193	ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor

ACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2498066‑2497909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccggaCAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGA  >  NC_002947/2498007‑2498127                                                                                                                                                                                                                                                                                         ACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCGCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAA                                                                                                                                    <  1:243107/149‑1   TACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTAATTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAA                                                                                                                                    >  1:263991/1‑147     CGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGA                                                                                                                                  <  3:266324/147‑1       ACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCC                                                                                                                              <  3:163346/149‑1        CGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCG                                                                                                                             >  7:31511/1‑149               GCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGG                                                                                                                            <  3:79084/143‑1               GCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGG                                                                                                                            <  4:249517/143‑1                                                                                    CGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGC                                                  >  3:76589/1‑148                                                                                          TACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACC                                              >  1:130811/1‑146                                                                                          TACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACC                                              <  2:130811/146‑1                                                                                                                                   GGAACGGGCTTGCCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGA  <  4:76589/149‑1                                                                                                                                                         GCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACC                                              >  1:307902/1‑83                                                                                                                                                         GCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACC                                              <  2:307902/83‑1                                                                                                                                                           CGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGT                          >  7:75362/1‑101                                                                                                                                                           CGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGT                          <  8:75362/101‑1                                                                                                                                                                                                                                                                                         ACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCGCTAAGAGGCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2498066‑2497909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccggaCAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGA  >  NC_002947/2498007‑2498127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.