| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2497909 = | 32 (0.590) | 4 (0.080) | 4/238 | NT | 8.6% | intergenic (+10/‑191) | PP_2192/PP_2193 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor |
| ? | NC_002947 | 2498007 = | 56 (1.130) | intergenic (+108/‑93) | PP_2192/PP_2193 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor | |||||
AGCAAGCTGGCTGCGATGGAAGTGAGCGGGGTGTTTGACCTGGATGAACCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGA > NC_002947/2497771‑2498056 | aGCAAGCTGGCTGCGATGGAAGTGAGCGGGGTGTTTGACCTGGATGAACCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCtt < 3:254197/149‑1 (MQ=255) cAAGCTGGCTGCGATGGAAGTGAGCGGGGTGTTTGACCTGGATGAACCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAg > 1:322094/1‑149 (MQ=255) tGGAAGTGAGCGGGGTGTTTGACCTGGATGAACCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTc < 3:157724/149‑1 (MQ=255) tcagaggcacgaatgagcttcctgacaagtcgtaaatgagaatgggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCGGCCTCTTAGCGGCAAGCCCGTTcc < 4:76589‑M1/28‑1 (MQ=255) cTGGATGAACCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGTGATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCtt > 1:66212/1‑148 (MQ=255) acaagtcgtaaatgagaatgggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCg < 8:75362‑M1/4‑1 (MQ=255) acaagtcgtaaatgagaatgggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCg > 7:75362‑M1/98‑101 (MQ=255) aaCCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAggcgggc < 2:209291/149‑1 (MQ=255) cTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGACGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAATCCCGTTCCTGCACAGATCGCACAATCTTCAggcgggcg > 4:238651/1‑147 (MQ=255) ccTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCTTTg > 2:263991/1‑149 (MQ=255) ggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCGGc > 1:307902‑M1/78‑83 (MQ=255) ggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCGGc < 2:307902‑M1/6‑1 (MQ=255) ggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTa < 2:130811‑M1/69‑1 (MQ=255) ggttgctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTa > 1:130811‑M1/78‑146 (MQ=255) cGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGc < 2:322094/149‑1 (MQ=255) gctgatcagtctcactacgacgatctggcttgcaggaacttgcagtgccaaatggaaaatatttttatttctgTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCg > 3:76589‑M1/74‑148 (MQ=255) gAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTCGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGcc < 4:300463/149‑1 (MQ=255) agcagcGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGccc < 2:66212/149‑1 (MQ=255) gcagcGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCcg < 3:274340/149‑1 (MQ=255) cagcGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCcgc > 8:255479/1‑149 (MQ=255) gcGGT‑ATGGCCTGAAGGTGCCTTACCTGCCGTGGTTGGCCGAGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCACGCCCGTGCCTGCACAGAGCGCACAATCTTCAGGCGGGCGCAGTCGTGGTAGGAGCGGGCTTGCCCGCGa > 3:198759/1‑149 (MQ=255) gT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGaa > 8:269136/1‑147 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGcc < 2:313298/135‑1 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGcc > 1:313298/1‑135 (MQ=255) aCCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATaaaaa > 4:120735/1‑148 (MQ=255) cTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAg > 5:56424/1‑137 (MQ=255) cTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAg < 6:56424/137‑1 (MQ=255) gTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGGCAGAAATAAAAATATTTTCCAtt > 4:226373/1‑149 (MQ=255) ttGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAg < 3:27849/128‑1 (MQ=255) ttGGCCGGGGTGCATTGATCAGCCTGTTCCGTCCTCTTAGCGGCAAGCCCGTTCCTTCACAGATCGCACAATCTTCAGGCGTGCGCAGTCTTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCAttt < 3:238651/149‑1 (MQ=255) gCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTgg > 7:266126/1‑148 (MQ=255) cGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTc < 8:206390/71‑1 (MQ=255) gtgCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATAtttt < 5:221417/134‑1 (MQ=255) gtgCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATAtttt > 6:221417/1‑134 (MQ=255) tgCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCaa < 3:120735/149‑1 (MQ=255) aTTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGtt > 6:341569/1‑149 (MQ=255) aTCAGCCTGTTGCGGCCGGGTATCGGCAAGGGCGTGCCGGTTCAGTTGGCACTCTCTTCAGGCGGGCGCAGTCGTGGTAGGAGGGGGCTTGCGCGCGAAGTGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCTTGTTcgt < 4:198759/148‑3 (MQ=255) aGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGGCAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCaa < 3:226373/149‑1 (MQ=255) gCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAg > 8:31511/1‑149 (MQ=255) gCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAg > 8:72148/1‑149 (MQ=255) ccTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGc > 8:130969/1‑149 (MQ=255) ccTGTTCCGGCCTCTTAGCGGCAAGACCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTACCATTTAGCACTGCAAGTTCCTCCAAGc > 8:135593/1‑149 (MQ=255) cTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGt < 4:109441/138‑1 (MQ=255) cTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGt > 3:109441/1‑138 (MQ=255) ttCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGa < 7:269136/149‑1 (MQ=255) | AGCAAGCTGGCTGCGATGGAAGTGAGCGGGGTGTTTGACCTGGATGAACCTGAGGCCCTGTTGCGGACGTTGGAGCAGCGGT‑ATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGA > NC_002947/2497771‑2498056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |