New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2558475	58 (1.070)	4 (0.080)	4/248	NT	7.1%	coding (735/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit
	?	NC_002947	= 2558511	49 (0.950)					coding (771/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit

ACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2558335‑2558475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgccTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGAT  <  NC_002947/2558511‑2558467                                                                                                                                                                                            ACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCC                                       >  7:2255/1‑149          CCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCCACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCGGGCCAAGCCTGCCGCCGACGATCTGGCCATCAACGCC                                               >  3:196523/1‑132                               GCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGG         >  7:75591/1‑149                                    CCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTG    <  8:2255/149‑1                                      GCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGAT  <  8:75591/149‑1                                                                                                                                                                                            ACGCAGCTGCCGGAAGACAGCGCAGAGGGCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2558335‑2558475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgccTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGAT  <  NC_002947/2558511‑2558467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.