New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2558475	58 (1.070)	4 (0.080)	4/248	NT	7.1%	coding (735/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit
	?	NC_002947	= 2558511	49 (0.950)					coding (771/2235 nt)	fepA	ferric enterobactin transport system outer membrane subunit

GCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAACGGCGGCGGAGATGTCGACTTC  >  NC_002947/2558363‑2558658                                                                                                                                                     |                                                                                                                                                    gcgcCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGaa                                                                                                                                                     <  6:126846/149‑1 (MQ=255)                ccAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAg                                                                                                                                      >  4:59802/1‑149 (MQ=255)                 cAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAg                                                                                                                                      >  2:113293/1‑148 (MQ=255)                  aaCTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGa                                                                                                                                    >  6:252005/1‑149 (MQ=255)                           cTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACgg                                                                                                                           <  2:2256/149‑1 (MQ=255)                                      ccTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCt                                                                                                                <  2:98260/149‑1 (MQ=255)                                           ccGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGaaa                                                                                                           <  5:252005/149‑1 (MQ=255)                                            cGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGCCTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCGGGAAAc                                                                                                          <  4:247279/149‑1 (MQ=255)                                            cGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAAc                                                                                                          >  6:353906/1‑149 (MQ=255)                                             gATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACt                                                                                                         <  3:27558/149‑1 (MQ=255)                                              aTAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCctgc                                                                                                                      <  6:72242/135‑1 (MQ=255)                                              aTAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCctgc                                                                                                                      >  5:72242/1‑135 (MQ=255)                                                  ccTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGaaa                                                                                                           <  6:20908/142‑1 (MQ=255)                                                  ccTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGaaa                                                                                                           >  5:20908/1‑142 (MQ=255)                                                  ccTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAac                                                                                                     >  2:181233/1‑148 (MQ=255)                                                   cTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGa                                                                                                                   >  6:233012/1‑133 (MQ=255)                                                   cTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGa                                                                                                                   <  5:233012/133‑1 (MQ=255)                                                   cTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAacga                                                                                                   >  1:230622/1‑149 (MQ=255)                                                            cGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCAcc                                                                                           <  3:320084/148‑1 (MQ=255)                                                              ccTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAg                                                                                                                                      >  7:316852/1‑103 (MQ=255)                                                              ccTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAg                                                                                                                                      <  8:316852/103‑1 (MQ=255)                                                              ccTGTACGGCGCCGTGTCCACGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAAAAAGGACATCCCCGGCCTGCTGAGCTGGAAACTGAACGACGAGCAcaggc                                                                                        <  8:259655/149‑5 (MQ=255)                                                                     ggcggcCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGc                                                                                 >  1:171796/1‑149 (MQ=255)                                                                     ggcggcCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGc                                                                                 <  5:353906/149‑1 (MQ=255)                                                                     ggcggcCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGc                                                                                 >  2:315705/1‑149 (MQ=255)                                                                        ggcCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAg                                                                                  <  4:205403/145‑1 (MQ=255)                                                                        ggcCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAg                                                                                  >  3:205403/1‑145 (MQ=255)                                                                        ggcCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAg                                                                              >  6:98559/1‑149 (MQ=255)                                                                                cAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGaa                                                                                   <  4:218673/136‑1 (MQ=255)                                                                                cAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGaa                                                                                   >  3:218673/1‑136 (MQ=255)                                                                                      tGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGcc                                                                >  7:85205/1‑149 (MQ=255)                                                                                             gacgaTCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAggg                                                         >  7:139718/1‑149 (MQ=255)                                                                                             gacgaTCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAg                                                           >  1:335432/1‑147 (MQ=255)                                                                                             gacgaTCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGGCAg                                                           <  2:335432/147‑1 (MQ=255)                                                                                                      gACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAac                                                                                                     >  8:61609/1‑96 (MQ=255)                                                                                                      gACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAac                                                                                                     <  7:61609/96‑1 (MQ=255)                                                                                                      gACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACAttt                                                 <  5:98559/148‑1 (MQ=255)                                                                                                       aCATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACAttttt                                               <  1:181233/149‑1 (MQ=255)                                                                                                       aCATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACAttttt                                               <  2:171796/149‑1 (MQ=255)                                                                                                         aTCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAggcgttgatgtccagatcgtcggcgtcagtcttggccaggccgccgtacaggcggaaacccaggttatcggtcaggccgccaccgaggttgaagttggctcggc                                             <  8:75591‑M2/149‑105 (MQ=255)                                                                                                         aTCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGc                                                                 <  3:179747/129‑1 (MQ=255)                                                                                                         aTCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCACAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGc                                             >  5:258988/1‑149 (MQ=255)                                                                                                           cAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAggcgttgatgtccagatcgtcggcgtcagtcttggccaggccgccgtacaggcggaaacccaggttatcggtcaggccgccaccgaggttgaagttggctcggcgg                                           <  8:2255‑M2/149‑107 (MQ=255)                                                                                                           cAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACAttttt                                               <  2:154132/145‑1 (MQ=255)                                                                                                           cAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACAttttt                                               >  1:154132/1‑145 (MQ=255)                                                                                                             aCGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGc                                         >  5:225966/1‑149 (MQ=255)                                                                                                              cGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCg                                        <  3:59802/149‑1 (MQ=255)                                                                                                                ccGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAggcgttgatgtccagatcgtcggcgtcagtcttggccaggccgccgtacaggcggaaacccaggttatcggtcaggccgccaccgaggttgaagttggctcggcggctggc                                      >  7:75591‑M2/1‑38 (MQ=255)                                                                                                                          caccaGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACa                            >  4:325693/1‑149 (MQ=255)                                                                                                                                   ccTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCt                                                                                       <  7:300388/81‑1 (MQ=255)                                                                                                                                   ccTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCt                                                                                       >  8:300388/1‑81 (MQ=255)                                                                                                                                   ccTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAAcggcg                   >  8:264249/1‑149 (MQ=255)                                                                                                                                              ggcgggAAggcgttgatgtccagatcgtcggcgtcagtcttggccaggccgccgtacaggcggaaacccaggttatcggtcaggccgccaccgaggttgaagttggctcggcggctggcgccctctgcgctgtcttccggcagctgcgt        >  7:2255‑M2/1‑8 (MQ=255)                                                                                                                                              ggcgggAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAACGGCGGCGGAGATGTc        <  6:225966/149‑1 (MQ=255)                                                                                                                                                   gAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAACGGCGGCGGAGATGTCGACtt   >  3:213164/1‑149 (MQ=255)                                                                                                                                                    aaGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAACGGCGGCGGAGATGTCGACTTc  <  7:264249/149‑1 (MQ=255)                                                                                                                                                    aaGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAACGGCGGCGGAGATGTCGACTTc  <  2:230622/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGCCAGCCGCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCGGGCATGCCACCAGCGCCCTGGTAGCGGGGCGGGAAGGCGTTCGCAACAAGGACATCAACGGCCTGCTGAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCGACACCATGAACAGCAACGGCGGCGGAGATGTCGACTTC  >  NC_002947/2558363‑2558658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.