New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2574487	66 (1.220)	4 (0.080)	4/246	NT	5.8%	coding (1243/1566 nt)	PP_2257	aerotaxis receptor
	?	NC_002947	= 2574542	68 (1.330)					coding (1298/1566 nt)	PP_2257	aerotaxis receptor

GCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2574333‑2574487 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctgcTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTCGGCGCCACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAG  <  NC_002947/2574542‑2574399                                                                                                                                                                                                                                                                                                             GCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCTGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATG                                                                                                                                                        >  4:206502/1‑149   AAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGTTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCC                                                                                                                                                      <  2:126526/149‑1     ACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCT                                                                                                                                                    >  6:171856/1‑149                                                   GCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTC                                                                                                      >  8:8284/1‑149                                                            GCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTCGGCGCCACT                                                                                             >  7:164574/1‑149                                                                GGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTCGGCGCCACTGCGC                                                                                         <  7:8284/149‑1                                                                   CTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTCGGCGCCACTGCGCAGG                                                                                      <  8:164574/149‑1                                                                                                                                                       CCTGCTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTCGGCGCCACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAG  >  8:139622/1‑149                                                                                                                                                                                                                                                                                                             GCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2574333‑2574487 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctgcTCGGCACCGTCGATGCCTCGGCTGGCGATCGCCACGGCTTCCTCGGCGCCACTGCGCAGGGCATCGATGATGGCCTGGATGTGCAGGGTGGACTGGCGGGTCTTGTCGGCCAGTGCCCGCACCTCGTCGGCGACCACGGCAAAG  <  NC_002947/2574542‑2574399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.