New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2574487	66 (1.220)	4 (0.080)	4/246	NT	5.8%	coding (1243/1566 nt)	PP_2257	aerotaxis receptor
	?	NC_002947	= 2574542	68 (1.330)					coding (1298/1566 nt)	PP_2257	aerotaxis receptor

AACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAGCCAGCAGATGG  >  NC_002947/2574340‑2574634                                                                                                                                                    |                                                                                                                                                     aaccTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTgcg                                                                                                                                                     >  4:142928/1‑149 (MQ=255)           cccTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGCTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGcc                                                                                                                                           >  4:71904/1‑149 (MQ=255)            ccTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGcc                                                                                                                                           >  4:107959/1‑148 (MQ=255)             cTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGcc                                                                                                                                           >  3:72654/1‑147 (MQ=255)             cTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGa                                                                                                                                         <  7:146076/149‑1 (MQ=255)             cTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGACGGGGCTTTGCCGTGGTCGCCGACGAGGTACGGGCACTGGCCGACAACACCCGCCAGTCCACCCTGCACATCCAAGCCATCAACGATGCCCTGCGCAGTGgcgac                                                                                                                                           >  8:61666/1‑145 (MQ=38)             cTCAACGCCGCCATCGAGGCTGCCCGCGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGa                                                                                                                                         <  2:3306/149‑1 (MQ=255)              tCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAg                                                                                                                                        >  2:326236/1‑149 (MQ=255)                   gccgccATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGc                                                                                                                                   <  7:61666/149‑1 (MQ=255)                    ccgccATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGcc                                                                                                                                  <  7:38709/149‑1 (MQ=255)                         aTCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGc                                                                                                                             >  5:353290/1‑149 (MQ=255)                           cGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGa                                                                                                                           >  4:44120/1‑149 (MQ=255)                            gAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGAt                                                                                                                          >  4:9058/1‑149 (MQ=255)                                           ggCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGACAGTCCACCCTGCACATCCAGGCCATCATCGATGCACTGCGCAGTGGCGCCGAGGAAGCCTTGGCTATCGCCAGCCGAGGCAt                                                                                                           >  4:227069/1‑149 (MQ=255)                                            gCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCtcggcaccgtcgatgcctcggctggcgatcgccacggcttcctc                                                                                                          >  8:8284‑M1/1‑105 (MQ=255)                                            gCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATc                                                                                                          <  1:232569/149‑1 (MQ=255)                                              gAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGa                                                                                                        >  5:235535/1‑149 (MQ=255)                                                gCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACg                                                                                                      <  3:317107/149‑1 (MQ=255)                                                    ggCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGc                                                                                                  <  3:142928/149‑1 (MQ=255)                                                     gCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCtcggcaccgtcgatgcctcggctggcgatcgccacggcttcctcggcgccact                                                                                                 >  7:164574‑M1/1‑96 (MQ=255)                                                     gCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGcc                                                                                                 <  8:24956/149‑1 (MQ=255)                                                       cGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGcc                                                                                                 >  7:139622/1‑147 (MQ=255)                                                         gggCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCtcggcaccgtcgatgcctcggctggcgatcgccacggcttcctcggcgccactgcgc                                                                                             <  7:8284‑M1/149‑58 (MQ=255)                                                            cTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCtcggcaccgtcgatgcctcggctggcgatcgccacggcttcctcggcgccactgcgcagg                                                                                          <  8:164574‑M1/149‑61 (MQ=255)                                                            cTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAgcagg                                                                                          >  8:139622‑M2/1‑144 (MQ=255)                                                                 ccGTGGTCGCCGACGAGGTGCGGCCACTGGCCGACAAGA‑CCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTg                                                                                    >  2:205110/1‑149 (MQ=255)                                                                  cGTGGGCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCCTCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTg                                                                                    <  7:178944/149‑1 (MQ=255)                                                                   gTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTgcg                                                                                                                                                     <  6:125962/83‑1 (MQ=255)                                                                   gTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTgcg                                                                                                                                                     >  5:125962/1‑83 (MQ=255)                                                                    tGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAg                                                                                                               >  2:94417/1‑120 (MQ=255)                                                                      ggcgccgccgcGGTGCGGGCCCTGGGCGCCCAGCGCCGCGCGGCCCCCCTGCACATCCCGGCCTTCTGCGATGCCCTGCGCAGTGGCGCCGAGGCACCCGCGGCGATCGCCCGGCGAGGCATCGACGGTGCCGAGCCGGGCGCTGCCCa                                                                                <  6:156644/147‑1 (MQ=255)                                                                       tCGCCGACGAGGTGCGGGCTCTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAg                                                                               <  5:54516/149‑1 (MQ=255)                                                                        cGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAgg                                                                              <  3:206502/149‑1 (MQ=255)                                                                         gCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGt                                                                             >  1:67284/1‑149 (MQ=255)                                                                         gCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGt                                                                             <  5:171856/149‑1 (MQ=255)                                                                         gCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGt                                                                             <  3:107959/149‑1 (MQ=255)                                                                            gacgaGGTGCGGCCACTGGCCGACAAGA‑CCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAg                                                                         <  1:205110/149‑1 (MQ=255)                                                                             acgaGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATTGACGGTGCCGAGCAGGGCGTTGCCCAGGTGc                                                                           >  6:343555/1‑147 (MQ=255)                                                                             acgaGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATTGACGGTGCCGAGCAGGGCGTTGCCCAGGTGc                                                                           <  5:343555/147‑1 (MQ=255)                                                                                aGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCAAGGTGCAGGaa                                                                      >  4:202099/1‑149 (MQ=255)                                                                                 ggTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGc                                                                                                                       <  2:114795/99‑1 (MQ=255)                                                                                 ggTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGc                                                                                                                       >  1:114795/1‑99 (MQ=255)                                                                                    gCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTc                                                                  >  6:63167/1‑149 (MQ=255)                                                                                       ggCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGc                                                               <  1:326236/149‑1 (MQ=255)                                                                                          aCTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAgg                                                            >  1:235143/1‑149 (MQ=255)                                                                                           cTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGgc                                                           <  3:44120/149‑1 (MQ=255)                                                                                                  aCAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑t                                                   <  3:124287/149‑1 (MQ=255)                                                                                                  aCAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑t                                                   <  3:71904/149‑1 (MQ=255)                                                                                                         ccGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCAtt                                             >  3:107323/1‑148 (MQ=255)                                                                                                         ccGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTc                                            <  3:9058/149‑1 (MQ=255)                                                                                                          cGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCg                                           >  2:86065/1‑149 (MQ=255)                                                                                                                  cACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCgg                                   >  3:270958/1‑149 (MQ=255)                                                                                                                  cACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCgg                                   <  5:63167/149‑1 (MQ=255)                                                                                                                  cACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCgg                                   >  7:92869/1‑149 (MQ=255)                                                                                                                     ccTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCATGACGCGGTAc                                <  4:107323/149‑1 (MQ=255)                                                                                                                      cTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACa                               <  2:283492/149‑1 (MQ=255)                                                                                                                      cTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACa                               >  4:214173/1‑149 (MQ=255)                                                                                                                        gCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCAt                                                                                                           >  2:207774/1‑72 (MQ=255)                                                                                                                        gCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCAt                                                                                                           <  1:207774/72‑1 (MQ=255)                                                                                                                        gCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAgc                             >  6:226227/1‑149 (MQ=255)                                                                                                                           caTCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCa                          <  6:235535/149‑1 (MQ=255)                                                                                                                           caTCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCa                          >  8:311048/1‑149 (MQ=255)                                                                                                                            aTCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCa                                               <  7:70552/127‑1 (MQ=255)                                                                                                                            aTCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCa                                               >  8:70552/1‑127 (MQ=255)                                                                                                                                aGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGc                     >  4:255522/1‑149 (MQ=255)                                                                                                                                  gCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑Tg                                                  <  8:11376/118‑1 (MQ=255)                                                                                                                                  gCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑Tg                                                  >  7:11376/1‑118 (MQ=255)                                                                                                                                        ctcGATGCCCTGATCATTGGCGCCGAGGAAGCAGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCTTTGCCCAGGTGCAGGAAGCTCGTCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGa              <  3:227069/147‑1 (MQ=255)                                                                                                                                        atcGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGa              <  6:353290/148‑1 (MQ=255)                                                                                                                                        atcGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAg             >  5:310834/1‑149 (MQ=255)                                                                                                                                         tcGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAGc            >  4:218526/1‑149 (MQ=255)                                                                                                                                          cGATGCCGTGGGGTGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAgg                                                                        <  4:310990/89‑1 (MQ=255)                                                                                                                                          cGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAgg                                                                        >  3:310990/1‑89 (MQ=255)                                                                                                                                               cccTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAGCcag         >  4:277797/1‑146 (MQ=255)                                                                                                                                                ccTGCtcggcaccgtcgatgcctcggctggcgatcgccacggcttcctcggcgccactgcgcagggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaag      >  8:139622‑M1/1‑5 (MQ=255)                                                                                                                                                ccTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAgcagggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaag      <  8:164574‑M2/149‑90 (MQ=255)                                                                                                                                                   gcgcAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAgcagggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccc   <  7:8284‑M2/149‑93 (MQ=255)                                                                                                                                                    cgcAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGGACTGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAGCCAGCAGATgg  <  1:86065/149‑1 (MQ=255)                                                                                                                                                    cgcAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAGCCAGCAGATg   <  7:63610/147‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGGCATCGACGGTGCCGAGCAGGGCGTTGCCCAGGTGCAGGAAGCTCGGCAGGCGCTGCA‑TGGCATTCGTGACGCGGTACAGCGCATCAGCGATATGAGCCAGCAGATGG  >  NC_002947/2574340‑2574634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.