| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2791195 = | 58 (1.070) | 3 (0.060) | 3/244 | NT | 5.9% | coding (353/1212 nt) | sstT | serine/threonine transporter SstT |
| ? | NC_002947 | 2791237 = | 42 (0.830) | coding (311/1212 nt) | sstT | serine/threonine transporter SstT | |||||
TCGTCACGGCCAGGAAACCCACATTCGCCCGATCCTCTGGCTGTACCTGCTGGGCACCTTTGCCGCAGCAGTGGTGGCCGTGTTTGCCAGCATGCTGTTTCCGTCGCACCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2791344‑2791195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGGCCGTGACGATGGTTGGCGACCGAAGC > NC_002947/2791237‑2791361 TCGTCACGGCCAGGAAACCCACATTCGCCCGATCCTCTGGCTGTACCTGCTGGGCACCTTTGCCGCAGCAGTGGTGGCCGTGTTTGCCAGCATGCTGTTTCCGTCGCACCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAG < 6:337000/149‑1 ACCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGGCCGTGAt > 8:165327/1‑148 CTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGG < 1:292906/140‑1 CTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGG > 2:292906/1‑140 CCAGGTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGGCCGTGACGATGGTTGGCGACCGAAGC > 5:273112/1‑130 CCAGGTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGGCCGTGACGATGGTTGGCGACCGAAGC < 6:273112/130‑1 TCGTCACGGCCAGGAAACCCACATTCGCCCGATCCTCTGGCTGTACCTGCTGGGCACCTTTGCCGCAGCAGTGGTGGCCGTGTTTGCCAGCATGCTGTTTCCGTCGCACCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2791344‑2791195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggTGCGACGGAAACAGCATGCTGGCAAACACGGCCACCACTGCTGCGGCAAAGGTGCCCAGCAGGTACAGCCAGAGGATCGGGCGAATGTGGGTTTCCTGGCCGTGACGATGGTTGGCGACCGAAGC > NC_002947/2791237‑2791361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |