New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2903987 = | 37 (0.680) | 3 (0.060) | 3/248 | NT | 7.9% | coding (941/1353 nt) | PP_2556 | chromate transporter |
? | NC_002947 | 2904037 = | 35 (0.680) | coding (891/1353 nt) | PP_2556 | chromate transporter |
TCACCAAGGCGGCGCTGCTGACCTTCGGCGGTGCCTATGCGGTGCTGCCCTATGTCTATCAAGGGGCTGTCGGCCACTATGGCTGGCTGTCACCGACGCAGATGATCGATGGCCTGGCGCTGGGCGAGACCACGCCCGGGCCGCTGATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2904137‑2903987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcatCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGA > NC_002947/2904037‑2904140 TCACCAAGGCGGCGCTGCTGACCTTCGGCGGTGCCTATGCGGTGCTGCCCTATGTCTATCAAGGGGCTGTCGGCCACTATGGCTGGCTGTCACCGACGCAGATGATCGATGGCCTGGCGCTGGGCGAGACCACGCCCGGGCCGCTGAT > 4:164193/1‑148 CACCAAGGCGGCGCTGCTGACCTTCGGCGGTGCCTATGCGGTGCTGCCCTATGTCTATCAAGGGGCTGTCGGCCACTATGGCTGGCTGTCACCGACGCAGATGATCGATGGCCTGGCGCTGGGCGAGACCACGCCCGGGCCGCTGAT < 4:254927/147‑1 AGATGATCGATGGCCTGGCGCTGGGCGAGACCACGCACGGGCCGCTGATCATATGCGTCGGAGACAGCCAGCCATAGAGGCAGACAGCCCCTTGATAGACATAGGGCAGCAACGCATAGGCACCGCCGAAGCTCAGAAGAGACGCCTTG > 5:12810/1‑149 ATGATCGATGGCCTGGCGCTGGGCGAGACCACGCCCGGGCCGCTGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGT > 2:334952/1‑149 GATGGCCTGGCGCTGGGCGAGACCACGCCCGGGCCGCTGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGA < 1:334952/148‑1 TCACCAAGGCGGCGCTGCTGACCTTCGGCGGTGCCTATGCGGTGCTGCCCTATGTCTATCAAGGGGCTGTCGGCCACTATGGCTGGCTGTCACCGACGCAGATGATCGATGGCCTGGCGCTGGGCGAGACCACGCCCGGGCCGCTGATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2904137‑2903987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcatCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGA > NC_002947/2904037‑2904140 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |