New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2903987 =	37 (0.680)	3 (0.060)	3/248	NT	7.9%	coding (941/1353 nt)	PP_2556	chromate transporter
	?	NC_002947	2904037 =	35 (0.680)					coding (891/1353 nt)	PP_2556	chromate transporter

CACCAGGCCCGCTGCCACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAACCAGCCCATTTGCGTCAGTGTGCCGTGCCAGCCAAA  >  NC_002947/2903890‑2904177                                                                                                                                                    |                                                                                                                                             caaggcgtctcttctgagcttcggcggtgcctatgcgttgctgccctatgtctatcaaggggctgtctgcctctatggctggctgtctccgacgcatATGATCAGCGGCCCGTGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCt                                                                                                                                             >  5:12810‑M1/98‑149 (MQ=255)   ccAGGCCCGCTGCCACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGc                                                                                                                                           >  1:183570/1‑149 (MQ=255)         ccGCTGCCACTGCGCCAGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGt                                                                                                                                     >  7:72917/1‑149 (MQ=255)               ccACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAcagc                                                                                                                               <  8:146315/149‑1 (MQ=255)               ccACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCGGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAca                                                                                                                                 <  3:161248/147‑1 (MQ=255)                cACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAca                                                                                                                                 >  7:67556/1‑146 (MQ=255)                cACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTCCAGGTAGCCACCGACGAATCCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAca                                                                                                                                 <  8:67556/146‑1 (MQ=255)                cACTGCGCCCGCGAGGAACGCCTGGTGGGCCCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAcagc                                                                                                                               >  2:151865/1‑148 (MQ=255)                  cTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAcagccag                                                                                                                            <  6:26268/149‑1 (MQ=255)                  cTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGAcagccag                                                                                                                            <  4:274548/149‑1 (MQ=255)                        ccGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAg                                                                                                                      >  7:288926/1‑149 (MQ=255)                           cgAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGt                                                                                                                                     <  4:332357/131‑1 (MQ=255)                           cgAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGt                                                                                                                                     >  3:332357/1‑131 (MQ=255)                           cgAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTgg                                                                                                                   <  8:72917/149‑1 (MQ=255)                            gAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGc                                                                                                                  <  2:106293/149‑1 (MQ=255)                                 aCGCCTGGTGGGCGCCTAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATATTGGCCGACa                                                                                                             <  6:19116/149‑1 (MQ=255)                                   gCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGc                                                                                                           <  4:37396/149‑1 (MQ=255)                                                 gAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGAt                                                                                                   <  6:221129/143‑1 (MQ=255)                                                 gAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGAt                                                                                                   >  5:221129/1‑143 (MQ=255)                                                 gAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACa                                                                                              >  3:184346/1‑148 (MQ=255)                                                        ggCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGgcag                                                                                      <  2:183570/149‑1 (MQ=255)                                                             cAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCAcc                                                                                  <  5:95528/148‑1 (MQ=255)                                                                     cACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCa                                                                         >  3:164193/1‑149 (MQ=255)                                                                              aaccgacgaaGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAg                                                                <  1:151865/149‑1 (MQ=255)                                                                              aaccgacgaaGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAg                                                                >  5:74395/1‑149 (MQ=255)                                                                               accgacgaaGGCCGCCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGTCATAGGGCAGCACCGCATAGGCACCGCCGAAgg                                                               <  1:45200/149‑1 (MQ=255)                                                                                  gacgaaGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTca                                                            >  4:35072/1‑149 (MQ=255)                                                                                     gaaGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTcag                                                           >  6:175626/1‑147 (MQ=255)                                                                                              caccaTGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCt                                                >  6:157509/1‑149 (MQ=255)                                                                                                agatgatcgatggcctggcgctgggcgagaccacgcacgggccgctgatcatATGCGTCGGAGACAGCCAGCCATAGAGGCAGACAGCCCCTTGATAGACATAGGGCAGCAACGCATAGGCACCGCCGAAGCTCAGAAGAGACGCCTTg                                              >  5:12810‑M2/53‑149 (MQ=255)                                                                                                  atgatcgatggcctggcgctgggcgagaccacgcccgggccgctgatcatCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGt                                            >  2:334952‑M2/51‑149 (MQ=255)                                                                                                     ATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTga                                          >  4:164193‑M1/1‑148 (MQ=255)                                                                                                     ATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTg                                           <  4:254927‑M1/147‑1 (MQ=255)                                                                                                        gatggcctggcgctgggcgagaccacgcccgggccgctgatcatCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTgaaga                                       <  1:334952‑M2/104‑1 (MQ=255)                                                                                                         gCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACa                                                                                              >  3:218632/1‑92 (MQ=255)                                                                                                         gCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACa                                                                                              <  4:218632/92‑1 (MQ=255)                                                                                                         gCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAAc                                     >  3:143051/1‑149 (MQ=255)                                                                                                            gCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCtt                                               >  5:98441/1‑136 (MQ=255)                                                                                                            gCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCtt                                               <  6:98441/136‑1 (MQ=255)                                                                                                                      ggTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAACCAGCCCATTTGCg                        <  3:254927/149‑1 (MQ=255)                                                                                                                      ggTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGAGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCTCCGCCGAAGGTCAGCAGCGCCGGCTTGGTGAAGACCCAGCCCATTTGCg                        >  6:250911/1‑149 (MQ=255)                                                                                                                              ccAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAACCAGCCCATTTGCGTCAGtgtg                >  5:301811/1‑149 (MQ=255)                                                                                                                                           aTCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAACCAGCCCATTTGCGTCAGTGTGCCGTgccagcca    >  8:140482/1‑148 (MQ=255)                                                                                                                                            tCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAACCAGCCCATTTGCGTCAGTGTGCCGTGCCAGCCaaa  <  3:35072/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                             CACCAGGCCCGCTGCCACTGCGCCCGCGAGGAACGCCTGGTGGGCGCCGAACATCGGCTGCAGGTAGCCACCGACGAAACCGACGAAGGCCACCACCATGATCAGCGGCCCGGGCGTGGTCTCGCCCAGCGCCAGGCCATCGATCATCTGCGTCGGTGACAGCCAGCCATAGTGGCCGACAGCCCCTTGATAGACATAGGGCAGCACCGCATAGGCACCGCCGAAGGTCAGCAGCGCCGCCTTGGTGAAGAACCAGCCCATTTGCGTCAGTGTGCCGTGCCAGCCAAA  >  NC_002947/2903890‑2904177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.