| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3020517 = | 52 (0.960) | 4 (0.080) | 4/248 | NT | 7.1% | coding (1055/3519 nt) | PP_2638 | cellulose synthase operon protein C |
| ? | NC_002947 | 3020547 = | 55 (1.070) | coding (1085/3519 nt) | PP_2638 | cellulose synthase operon protein C | |||||
GCCGCCACATCGCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3020670‑3020517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcccTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTCGCCAGCAACGGCCAAAGGATGAATACGCGTTGCTGGGCCTGGCAGATGTCTCGCTGGCCGAGGGCGATGTGGCGGCTGCCGAGCGGCAGTACCTGC > NC_002947/3020547‑3020690 GCCGCCACATCGCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGCCCGCTCGGCTTTCTTCAGCAG > 7:85328/1‑149 CCACATCGCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCC < 6:210603/149‑1 CACATCGCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCC > 1:324768/1‑148 ACATCGCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCC > 1:67659/1‑148 GCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGACCGCTCGGCTTTCTTCAGCAGGGCCacatact > 6:145185/1‑142 CCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCCTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTCGCCAGCAACGGCCAAAGGATGAATACGCGTTGCTGGGCCTGGCAGATGTCTCGC < 5:156817/138‑1 CCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCCTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTCGCCAGCAACGGCCAAAGGATGAATACGCGTTGCTGGGCCTGGCAGATGTCTCGC > 6:156817/1‑138 CAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCCTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTC < 1:146668/80‑1 CAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCCTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTC > 2:146668/1‑80 GGCCCTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTCGCCAGCAACGGCCAAAGGATGAATACGCGTTGCTGGGCCTGGCAGATGTCTCGCTGGCCGAGGGCGATGTGGCGGCTGCCGAGCGGCAGTACCTGC < 6:129120/149‑1 GGCCCTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTCGCCAGCAACGGCCAAAGGATGAATACGCGTTGCTGGGCCTGGCAGATGTCTCGCTGGCCGAGGGCGATGTGGCGGCTGCCGAGCGGCAGTACCTGC < 8:232935/149‑1 GCCGCCACATCGCCCTCGGCCAGCGAGACATCTGCCAGGCCCAGCAACGCGTATTCATCCTTTGGCCGTTGCTGGCGAGCCTGCTGGTAAAGTGCGCGCGCACCGCGCACGTCTTTCACCTCCAGGGCCCGCTCGGCTTTCTTCAGCAGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3020670‑3020517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcccTGGAGGTGAAAGACGTGCGCGGTGCGCGCGCACTTTACCAGCAGGCTCGCCAGCAACGGCCAAAGGATGAATACGCGTTGCTGGGCCTGGCAGATGTCTCGCTGGCCGAGGGCGATGTGGCGGCTGCCGAGCGGCAGTACCTGC > NC_002947/3020547‑3020690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |