| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3077686 = | 61 (1.130) | 5 (0.100) | 4/248 | NT | 9.4% | coding (167/951 nt) | PP_2687 | hypothetical protein |
| ? | NC_002947 | 3077751 = | 38 (0.740) | coding (102/951 nt) | PP_2687 | hypothetical protein | |||||
CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3077839‑3077686‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcatCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTTGC > NC_002947/3077751‑3077898 CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCG > 6:171302/1‑149 CTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGG > 5:80425/1‑148 TTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCA > 3:9950/1‑149 CTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTC > 8:103560/1‑149 CCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCG > 7:288027/1‑149 CCCAGGCCGCGCGCAGCGACCGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATCCGTGCAAGGTTTTCTGAACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCG > 8:302334/1‑149 GCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATG < 7:103560/149‑1 CAATGTCGCTGATGGCCTCGGGCATCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAG < 8:288027/149‑1 TCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTTGC < 5:172728/149‑1 CCGCTTCCGACCTGTACTGGATGTCCCGCTACCTGGAGCGTGCAGAAAACCTTGCACGCATGCTCGAGGTCAGCTACTCGCTATCGCTGATGCCCCAGGCCGGGCGCAGCGACGGCCATGCCGAACTGGCAATGTCGCTGATGGCCTCGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3077839‑3077686‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcatCAGCGATAGCGAGTAGCTGACCTCGAGCATGCGTGCAAGGTTTTCTGCACGCTCCAGGTAGCGGGACATCCAGTACAGGTCGGAAGCGGTTCGCGAAAGCATGGCTCAGTCCTCCACCACCCAGGTGTCCTTGGTACCGCCGCCTTGC > NC_002947/3077751‑3077898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |