| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3183855 | 34 (0.630) | 6 (0.110) | 5/256 | NT | 12.8% | coding (343/768 nt) | PP_2794 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | = 3183915 | 48 (0.900) | coding (403/768 nt) | PP_2794 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
TCGATGTGACGAGCCGTGAGGACATCTGCCGGGTGCTCGATGCCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3183718‑3183855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTGAGGTTGGTGTCGAGCACGTGGT < NC_002947/3183915‑3183844 TCGATGTGACGAGCCGTGAGGACATCTGCCGGGTGCTCGATGCCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTC > 3:181260/1‑137TCGATGTGACGAGCCGTGAGGACATCTGCCGGGTGCTCGATGCCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTC < 4:181260/137‑1TCGATGTGACGAGCCGTGAGGACATCTGCCGGGTGCTCGAAGCCGCCGGCCCCCTGGATGTTCTGGTCACCATGGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCACGCCACCAacct > 4:75959/1‑144 TGAGGACATCTGCCGGGTGCTCGATGCCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGCCACCACCATGCGCCGGGCGCTTTCCT > 4:318730/1‑149 ATGCCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGGGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCT‑C‑AAGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTGAG < 7:225256/149‑1 CCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTGAGG > 1:218729/1‑149 CTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTGAGGTTGGTGTCGAG < 2:218729/149‑1 CTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTGAGGTTGGTGTCGAGCACGTGGT < 3:318730/148‑1 CGCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTG > 5:271929/1‑52 CGCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTG < 6:271929/52‑1 TCGATGTGACGAGCCGTGAGGACATCTGCCGGGTGCTCGATGCCGCCGGCCCGCTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3183718‑3183855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgCCACCACCATGCGCCGGGCGCTTTCCTGGGCCACGGCCCAGGCGCCCTTGAGGTTGGTGTCGAGCACGTGGT < NC_002947/3183915‑3183844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |