New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3183855 | 34 (0.630) | 6 (0.110) | 5/256 | NT | 12.8% | coding (343/768 nt) | PP_2794 | short‑chain dehydrogenase/reductase family oxidoreductase |
? | NC_002947 | = 3183915 | 48 (0.900) | coding (403/768 nt) | PP_2794 | short‑chain dehydrogenase/reductase family oxidoreductase |
CTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTGGAGTTGGCGCGCCATGGTATCCGG > NC_002947/3183771‑3184061 | cTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACTGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCggg < 1:259752/149‑1 (MQ=255) gATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCgggg > 3:55697/1‑147 (MQ=255) cTGCTCAACAATGCGGGGGTGAGCGACAGCCAGGCTTTGCTAGCCTGCGATGATCAATCCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAggggg < 3:75959/148‑1 (MQ=255) tCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGc < 5:138598/149‑1 (MQ=255) tCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGc > 7:15711/1‑149 (MQ=255) aacaaTGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCt > 6:182114/1‑149 (MQ=255) caaTGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGa < 7:16333/149‑1 (MQ=255) cGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAAt < 4:55697/149‑1 (MQ=255) cGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAAt < 5:182114/149‑1 (MQ=255) gggTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTc < 8:15711/149‑1 (MQ=255) tGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCAcc < 6:194489/149‑1 (MQ=255) gCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTc > 4:226304/1‑148 (MQ=255) gCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTc > 2:54236/1‑148 (MQ=255) ccTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAg > 7:179662/1‑149 (MQ=255) tGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCgt > 7:270300/1‑149 (MQ=255) cTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCgtgt > 6:92044/1‑149 (MQ=255) tGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAAt > 8:181940/1‑117 (MQ=255) tGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAAt < 7:181940/117‑1 (MQ=255) tCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCg > 1:274140/1‑149 (MQ=255) aaaCCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGc > 2:304338/1‑149 (MQ=255) aCCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGccc > 4:2075/1‑149 (MQ=255) ccTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGt > 8:206513/1‑142 (MQ=255) ccTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGt < 7:206513/142‑1 (MQ=255) cTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCt > 4:83578/1‑148 (MQ=255) aCCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGcgagcacgtggtcccaggtttgatcatcgcaggctagcaaaggctggctgtcgctcacccccgcattgttgaccag < 3:318730‑M2/148‑77 (MQ=255) aCCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTg < 5:92044/149‑1 (MQ=255) cTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGcgagcacgtggtcccaggtttgatcatcgcaggctagcaaaggctggctgtcgctcacccccgcattgttgaccagaacatccag < 2:218729‑M2/149‑86 (MQ=255) cTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCtt > 4:177824/1‑136 (MQ=255) cTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCtt < 3:177824/136‑1 (MQ=255) tCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTAc > 6:29189/1‑137 (MQ=255) tCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTAc < 5:29189/137‑1 (MQ=255) gACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAggc < 8:270300/149‑1 (MQ=255) gACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAgg < 8:179662/148‑1 (MQ=255) cAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAggccggcc > 8:43512/1‑149 (MQ=255) ccTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGcgagcacgtggtcccaggtttgatcatcgcaggctagcaaaggctggctgtcgctcacccccgcattgttgaccagaacatccagcgggccggcgg > 1:218729‑M2/1‑53 (MQ=255) cTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCTT‑G‑AGGTTGGTGTcgagcacgtggtcccaggtttgatcatcgcaggctagcaaaggctggctgtcgctcccccccgcattgttgaccagaacatccagcgggccggcggcat < 7:225256‑M2/149‑100 (MQ=255) cAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGcg > 5:271929‑M2/1‑50 (MQ=255) cAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGcg < 6:271929‑M2/52‑3 (MQ=255) cgggCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCAc < 7:43512/148‑1 (MQ=255) aGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCGGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCAc > 1:281243/1‑149 (MQ=255) ggCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTggcgg < 4:152407/127‑1 (MQ=255) ggCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTggcgg > 3:152407/1‑127 (MQ=255) tGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCcg > 3:334157/1‑149 (MQ=255) ccGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCAgcgc > 2:124177/1‑148 (MQ=255) cGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCa < 2:281243/149‑1 (MQ=255) ccAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAA‑GGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCAc < 7:246986/129‑1 (MQ=255) ccAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAA‑GGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCAc > 8:246986/1‑129 (MQ=255) cAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCt > 1:143618/1‑149 (MQ=255) aGGAAAGCGCCCGGCGCATGGTGGTGGcgagcacgtggtcccaggtttgatcatcgcaggctagcaaaggctggctgtcgctcacccccgcattgttgaccagaacatccagcgggccggcggcatcgagcacccggcagatgtcctca > 4:318730‑M2/1‑27 (MQ=255) aGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTg < 3:83578/149‑1 (MQ=255) gAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTg > 7:32561/1‑147 (MQ=255) gAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTGGa < 4:334157/149‑1 (MQ=255) aGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCAGCGCCATGGCGCgggtcag < 1:124177/149‑5 (MQ=255) gcgcCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAg < 2:345612/107‑1 (MQ=255) gcgcCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAg > 1:345612/1‑107 (MQ=255) cATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTGGAGTTGGCGCGCCATg > 5:227382/1‑149 (MQ=255) cATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTGGAGTTGGCGCGCCATg > 3:172642/1‑149 (MQ=255) aggttggtggcgtgcacgtggtcccaggtttgatcatcgcaggctagcaaaggctggctgtcgctcacccccgccatggtgaccagaacatccagggggccggcggcttcgagcacccggcagatgtcctcacggctcgtcacatcga > 4:75959‑M2/5‑10 (MQ=255) tggCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTGGAGTTGGCGCGCCATGGTATCCgg < 2:274140/149‑1 (MQ=255) | CTGGATGTTCTGGTCAACAATGCGGGGGTGAGCGACAGCCAGCCTTTGCTAGCCTGCGATGATCAAACCTGGGACCACGTGCTCGACACCAACCTCAAGGGCGCCTGGGCCGTGGCCCAGGAAAGCGCCCGGCGCATGGTGGTGGCGGGGAAGGGGGGCAGCCTGATCAATGTCACCTCGATCCTCGCCAGCCGTGTGGCCGGCGCCGTCGGCCCTTACCTGGCGGCCAAGGCCGGCCTGGCCCACCTGACCCGCGCCATGGCGCTGGAGTTGGCGCGCCATGGTATCCGG > NC_002947/3183771‑3184061 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |