| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3243408 = | 52 (0.960) | 5 (0.100) | 3/250 | NT | 10.3% | coding (1485/2289 nt) | PP_2839 | hypothetical protein |
| ? | NC_002947 | 3243481 = | 37 (0.710) | coding (1558/2289 nt) | PP_2839 | hypothetical protein | |||||
GTCGCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3243558‑3243408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGACGTGGCCGCGCCGTTCCGTGC > NC_002947/3243481‑3243614 GTCGCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGC > 4:204208/1‑149GTCGCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGC > 5:296285/1‑149 CAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACA > 2:248357/1‑149 CAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCAAGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACc > 1:68446/1‑148 GCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGAC > 3:20855/1‑149 TTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGC < 1:248357/149‑1 TTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGC < 4:20855/149‑1 GGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGACGTGGCCGCGCCGTTCCGTGC < 1:145741/139‑1 GGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGACGTGGCCGCGCCGTTCCGTGC > 2:145741/1‑139 GTCGCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3243558‑3243408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGACGTGGCCGCGCCGTTCCGTGC > NC_002947/3243481‑3243614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |