New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3394942 =	44 (0.810)	3 (0.060)	3/246	NT	6.3%	coding (443/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase
	?	NC_002947	3394991 =	47 (0.920)					coding (492/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase

GCCGCTCAACGCACCGGTGGCGACGTTGACCAGCAGCTTGTCCCACATGGTGCCGAGGATGTTGTCGCTGACCGTGGTGGCCAGCCCGGCATTGTTGAACGCTTCGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGTCGAGCTCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3395093‑3394942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgaAGCGTTCAACAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAACGTCGCCACCGGTGCGTTGAGCGGCATCACCAGGCTCAGCTACGGCCAGCTGTACAGCGAGCCGCTGC  >  NC_002947/3394991‑3395136                                                                                                                                                                                                                                                                                                            GCCGCTCAACGCACCGGTGGCGACGTTGACCAGCAGCTTGTCCCACATGGTGCCGAGGATGTTGTCGGTGACCGTGGTGGCCAGCCCGGCATTGTTGAACGCTTCGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGACGAGCTCGC                                                                                                                                                       >  8:140984/1‑149    GCTCAACGCACCGGTGGCGACGTTGACCAGCAGCTTGTCCCACATGGTGCCGAGGATGTTGTCGCTGACCGTGGTGGCCAGCCCGGCATTGTTGAACGCTTCGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGTCGAGCTCGCCGA                                                                                                                                                    >  5:86894/1‑149                                                                                   AGCCCGGCATTGTTGAACGCTTCGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGTCGAGCTCGCCGAAGCGTTCAACAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAAC                                                                     >  4:257440/1‑149                                                                                                       TTCGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGTCGAGCTCGCCGAAGCGTTCAACAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAACGTCGCCACCGGTGCGTTGAG                                                 >  1:209001/1‑149                                                                                                         CGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGTCGAGCTCGCCGAAGCGTTCAACAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAACGTCGCCACCGGTGCGTTGAGC                                                <  3:257440/148‑1                                                                                                                                                  TCGCCGAAGCGTTCAACAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAACGTCGCCACCGGTGCGTTGAGCGGCATCACCAGGCTCAGCTACGGCCAGCTGTACAGCGAGCCG      >  6:153321/1‑149                                                                                                                                                      CGAAGCGTTCATCAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAACGTCGCCACCGGTGCGTTGAGCGGCATCACCAGGCTCAGCTACGGCTCGCTGTACAGCTGGCCGtagc  <  3:302897/149‑5                                                                                                                                                                                                                                                                                                            GCCGCTCAACGCACCGGTGGCGACGTTGACCAGCAGCTTGTCCCACATGGTGCCGAGGATGTTGTCGCTGACCGTGGTGGCCAGCCCGGCATTGTTGAACGCTTCGGCGATGGCCTGCACGCGGGGCGTCAGCTGGCCGTCGAGCTCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3395093‑3394942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgaAGCGTTCAACAATGCCGGGCTGGCCACCACGGTCAGCGACAACATCCTCGGCACCATGTGGGACAAGCTGCTGGTCAACGTCGCCACCGGTGCGTTGAGCGGCATCACCAGGCTCAGCTACGGCCAGCTGTACAGCGAGCCGCTGC  >  NC_002947/3394991‑3395136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.