New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 343705741 (0.760)4 (0.080) 4/240 NT 9.4% coding (183/879 nt) PP_3056 tail fiber protein
?NC_002947 = 3437081 39 (0.780)coding (207/879 nt) PP_3056 tail fiber protein

CCACCAGTACAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3436933‑3437057
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggtgagGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCAGCAATGGGATACTTGGCCACCTGGGCGCGCAAGCTGGTTTGCTCGTTGGTCGGGGTGTAACCCGACGTACCGAGCGCGATGTGGGTGATCTCGGCAGAAAGCCCTGTACT  <  NC_002947/3437081‑3436938
                                                                                                                                                                                                                                                                             
CCACCAGTACAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCG                                                                                                                          >  3:115683/1‑149
         CAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCC                                                                                                                 <  4:115683/149‑1
                        AGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGT                                                                                                                                                     >  3:293993/1‑98
                        AGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGT                                                                                                                                                     <  4:293993/98‑1
                                       CGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCAG                                                                                                               >  1:340829/1‑121
                                       CGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCAG                                                                                                               <  2:340829/121‑1
                                                                                                                        GTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCAGCAATGGGATACTTGGCCACCTGGGCGCGCAAGCTGGTTTGCTCGTTGGTCGGGGTGTAACCCGACGTACCGAGCGCGATGTGGGTGATCTCGGCAGAAAGCCCTGTACT  >  4:323725/1‑149
                                                                                                                                                                                                                                                                             
CCACCAGTACAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3436933‑3437057
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggtgagGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCAGCAATGGGATACTTGGCCACCTGGGCGCGCAAGCTGGTTTGCTCGTTGGTCGGGGTGTAACCCGACGTACCGAGCGCGATGTGGGTGATCTCGGCAGAAAGCCCTGTACT  <  NC_002947/3437081‑3436938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.