New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3437057	41 (0.760)	4 (0.080)	4/240	NT	9.4%	coding (183/879 nt)	PP_3056	tail fiber protein
	?	NC_002947	= 3437081	39 (0.780)					coding (207/879 nt)	PP_3056	tail fiber protein

AGTACAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGCC  >  NC_002947/3436938‑3437225                                                                                                                                                |                                                                                                                                                  aGTACAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACctcac                                                                                                                                              >  4:323725‑M2/1‑144 (MQ=255)                 ccGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGc                                                                                                                              >  3:123475/1‑149 (MQ=255)                    agaTCACCCACATCGCGCTCGGTACGTCGGGTTACA‑CCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCgg                                                                                                                          <  2:194713/149‑1 (MQ=255)                           ccACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGt                                                                                                                    >  6:48843/1‑149 (MQ=255)                                tCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCTCGTTGTgg                                                                                                               <  4:164585/149‑1 (MQ=255)                                tCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGTGTTCTgg                                                                                                               <  2:77685/149‑1 (MQ=255)                                 cgcgCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTggg                                                                                                              >  3:5230/1‑149 (MQ=255)                                  gcgcTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGt                                                                                                             <  4:53786/149‑1 (MQ=255)                                        ggTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTg                                                                                                        >  6:227465/1‑148 (MQ=255)                                             gTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGt                                                                                                             <  2:16320/138‑1 (MQ=255)                                             gTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGt                                                                                                             >  1:16320/1‑138 (MQ=255)                                               cGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATtcac                                                                                                                                                   <  2:334520/98‑1 (MQ=255)                                               cGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATtcac                                                                                                                                                   >  1:334520/1‑98 (MQ=255)                                                  gTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCttt                                                                                            <  5:48843/149‑1 (MQ=255)                                                         cccGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCACGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAg                                                                                     >  4:208621/1‑149 (MQ=255)                                                               cAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATg                                                                               <  3:208621/149‑1 (MQ=255)                                                                   gAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCAc                                                                           >  5:62174/1‑149 (MQ=255)                                                                   gAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCAc                                                                           >  3:62441/1‑149 (MQ=255)                                                                     gCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGc                                                                         >  5:63585/1‑149 (MQ=255)                                                                       aaaCCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTg                                                                       >  7:250548/1‑149 (MQ=255)                                                                               ttGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGt                                                               >  6:278720/1‑149 (MQ=255)                                                                               ttGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGt                                                               >  1:314978/1‑149 (MQ=255)                                                                                   gcgcCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTgg                                                           <  2:314978/149‑1 (MQ=255)                                                                                    cgcCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGt                                                          <  5:227465/149‑1 (MQ=255)                                                                                       ccAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCg                                                        >  2:155024/1‑148 (MQ=255)                                                                                          ggTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATg                                                    <  8:250548/149‑1 (MQ=255)                                                                                                      tCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCAGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGctc                                        >  4:196783/1‑149 (MQ=255)                                                                                                          aTTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGAc                                    <  5:278720/149‑1 (MQ=255)                                                                                                             gCTGGCGGTGAGCGGCTGAGTGAGAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGAGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCt                                  <  7:60956/148‑1 (MQ=255)                                                                                                              cTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACctcaccgccagcaatgggatacttggccacctgggcgcgcaagctggtttgctcgttggtcggggtgtaacccgacgtaccgagcg                                                             >  1:340829‑M2/1‑35 (MQ=255)                                                                                                              cTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACctcaccgccagcaatgggatacttggccacctgggcgcgcaagctggtttgctcgttggtcggggtgtaacccgacgtaccgagcg                                                             <  2:340829‑M2/121‑87 (MQ=255)                                                                                                              cTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGAcc                                   <  6:277347/146‑1 (MQ=255)                                                                                                              cTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGAcc                                   >  5:277347/1‑146 (MQ=255)                                                                                                              cTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTa                                 <  4:123475/148‑1 (MQ=255)                                                                                                               tGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTAc                                >  3:258132/1‑148 (MQ=255)                                                                                                                ggCGGTGAGCGGCTGAGTGACAGCCTGATTCACctcaccgccagcaatgggatacttggccacctgggcgcgcaagctggtttgctcgttggtcggggtgtaacccgacgtaccgagcgcgatgtgggtgatctcggcagaaagccctg                               <  4:115683‑M2/149‑117 (MQ=255)                                                                                                                 gCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAg                             >  3:201056/1‑149 (MQ=255)                                                                                                                         cGGCTGAGTGACAGCCTGATTCACctcaccgccagcaatgggatacttggccacctgggcgcgcaagctggtttgctcgttggtcggggtgtaacccgacgtaccgagcgcgatgtgggtgatctcggcagaaagccctgtactggtgg                      >  3:115683‑M2/1‑24 (MQ=255)                                                                                                                           gCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATa                   <  6:62174/149‑1 (MQ=255)                                                                                                                             tGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATAcc                 >  5:252349/1‑149 (MQ=255)                                                                                                                                 tGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACt             >  6:129833/1‑149 (MQ=255)                                                                                                                                 tGACAGACTGATTAACCTCACCGCAATCGATGATGGACAGGAAGAGTTATGGGTGCGTGAAA‑TCTGCTTTCTGTTAGAAGATGGAACGCTGTTGGAGGTTTGGTCGCATGCGACTGACGCTCTTACCTACAATCCGGCCAATAACGACt             >  6:124423/1‑149 (MQ=255)                                                                                                                                   aCAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTg           <  4:62441/149‑1 (MQ=255)                                                                                                                                     aGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTGCTGGGTGCGTGAAT‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCt         <  4:5230/149‑1 (MQ=255)                                                                                                                                           aTTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTgg    <  5:129833/148‑1 (MQ=255)                                                                                                                                           aTTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTgg    <  5:124423/148‑1 (MQ=255)                                                                                                                                             tcacctcaccGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATTCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGcc  >  1:86372/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                  AGTACAGGGCTTTCTGCCGAGATCACCCACATCGCGCTCGGTACGTCGGGTTACACCCCGACCAACGAGCAAACCAGCTTGCGCGCCCAGGTGGCCAAGTATCCCATTGCTGGCGGTGAGCGGCTGAGTGACAGCCTGATTCACCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAA‑TCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGCC  >  NC_002947/3436938‑3437225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.