New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3474861 | 64 (1.180) | 3 (0.060) | 3/248 | NT | 5.1% | coding (1852/2517 nt) | PP_3087 | excinuclease ABC subunit A |
? | NC_002947 | = 3474897 | 51 (0.990) | coding (1816/2517 nt) | PP_3087 | excinuclease ABC subunit A |
ACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3474743‑3474861 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAAGGCACAGGGCTTCGACGCCGGGCGCTTTTCCTTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGC < NC_002947/3474897‑3474750 ACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGC > 5:189926/1‑116 ACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGC < 6:189926/116‑1 ATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAG < 5:54981/149‑1 CAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAA < 8:3102/149‑1 GCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAAGG < 3:263205/149‑1 GCCTGTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAAGGCACAGGTCTTCGACGCCGGGCGCTTTTCCTTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTC < 8:309235/149‑1 TGTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAAGGCACAGGGCTTCGACGCCGGGCGCTTTTCCTTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATG > 8:44232/1‑149 GTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAAGGCACAGGGCTTCGACGCCGGGCGCTTTTCCTTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGC < 8:164159/149‑1 ACGCTGGGCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3474743‑3474861 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgTTCGACCACGTGCGCAAATGCTTCGCGGCTACCGAGCAGGCCAAGGCACAGGGCTTCGACGCCGGGCGCTTTTCCTTCAACGTTGCCAAGGGCCGGTGCGCCAACTGCGAGGGAGAGGGTTTCGTCAGCGTCGAGCTGCTGTTCATGC < NC_002947/3474897‑3474750 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |