New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3474861	64 (1.180)	3 (0.060)	3/248	NT	5.1%	coding (1852/2517 nt)	PP_3087	excinuclease ABC subunit A
	?	NC_002947	= 3474897	51 (0.990)					coding (1816/2517 nt)	PP_3087	excinuclease ABC subunit A

GCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGTTCAGGTTCGTCTTC  >  NC_002947/3474750‑3475029                                                                                                                                                    |                                                                                                                                          gCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAc                                                                                                                                          <  8:164159‑M2/149‑2 (MQ=255)  cATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAca                                                                                                                                         >  8:44232‑M2/1‑147 (MQ=255)     gAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGACCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAcaggc                                                                                                                                      <  8:309235‑M2/149‑6 (MQ=255)       aCAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCt                                                                                                                                   >  3:155018/1‑149 (MQ=255)         agcagcTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCtgt                                                                                                                                 <  4:155018/149‑1 (MQ=255)          gcagcTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCtgtg                                                                                                                                >  3:192414/1‑149 (MQ=255)           aagcTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCtgtg                                                                                                                                >  6:117783/2‑148 (MQ=255)             gcTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAg                                                                                                                             <  4:192414/149‑1 (MQ=255)                    gCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGc                                                                                                                        >  5:7208/1‑147 (MQ=255)                    gCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGCAGGttgac                                                                                                                       >  4:9775/1‑144 (MQ=255)                         cGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTg                                                                                                                 <  5:264820/149‑1 (MQ=255)                          gAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTgg                                                                                                                <  7:309235/149‑1 (MQ=255)                               ccTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAgcgc                                                                                                           >  7:60154/1‑149 (MQ=255)                                ctctCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGcgcg                                                                                                          <  3:157918/149‑1 (MQ=255)                                ctctCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGcgcg                                                                                                          <  4:56421/149‑1 (MQ=255)                                ctctCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGcgcg                                                                                                          <  4:61063/149‑1 (MQ=255)                                   tcCCTCGCAGTTTGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTACCCGCGAAGCATTTGCGCACGTGGTCGAACCAGGCCTGTGTAGGTGGCCAGGTTg                                                                                                                 <  7:46691/140‑1 (MQ=255)                                   tcCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTg                                                                                                                 >  8:46691/1‑139 (MQ=255)                                   tcCCTCGCAGTTGGCGCACCGGCCCTTAGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCgcggcg                                                                                                       >  1:189474/1‑149 (MQ=255)                                        cGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGGGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCgg                                                                                                >  3:205664/1‑149 (MQ=255)                                          cAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGcc                                                                                              <  8:53777/149‑1 (MQ=255)                                                gcgcACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCgg                                                                                        >  4:328287/1‑149 (MQ=255)                                                      cGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTg                                                                                <  4:137052/149‑1 (MQ=255)                                                      cGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTg                                                                                <  6:7208/149‑1 (MQ=255)                                                         cccTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGt                                                                              >  7:28768/1‑148 (MQ=255)                                                           cTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCaa                                                                           <  2:189474/149‑1 (MQ=255)                                                              ggCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAAc                                                                          <  8:28768/147‑1 (MQ=255)                                                                cAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGc                                                                      >  4:30331/1‑149 (MQ=255)                                                                       gAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATc                                                                                          <  7:265143/124‑1 (MQ=255)                                                                       gAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATc                                                                                          >  8:265143/1‑124 (MQ=255)                                                                       gAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGcc                                                               >  7:22307/1‑149 (MQ=255)                                                                         aGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGc                                                             <  5:116966/149‑1 (MQ=255)                                                                         aGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGc                                                             <  8:60154/149‑1 (MQ=255)                                                                          ggAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCt                                                            >  1:143641/1‑149 (MQ=255)                                                                             aaaGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTTCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTTGCCAGGTTGGAGCGCGTCG‑‑TGAGGCCGATCGG‑‑CTTCTGTTCAACCTGCACCAGCCGCttta                                                         <  5:117783/149‑3 (MQ=255)                                                                             aaaGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGa                                                         <  3:30331/149‑1 (MQ=255)                                                                             aaaGCGCCCGGCGTCGAAGCCCTGGGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGa                                                         <  4:205664/149‑1 (MQ=255)                                                                              aaGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑c                                                                                     >  5:203721/1‑120 (MQ=255)                                                                              aaGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑c                                                                                     <  6:203721/120‑1 (MQ=255)                                                                              aaGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGAt                                                        >  6:275978/1‑149 (MQ=255)                                                                                   cccGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGAtgctgc                                                   <  8:22307/149‑1 (MQ=255)                                                                                     cGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGc                                                                                                  >  7:218488/1‑102 (MQ=255)                                                                                     cGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGc                                                                                                  <  8:218488/102‑1 (MQ=255)                                                                                       gCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAg                                               <  7:164159/149‑1 (MQ=255)                                                                                          tCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGccc                                            <  3:41605/149‑1 (MQ=255)                                                                                            gAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGGCGCTTGATGCTGCCAAGCCCgg                                          >  3:208183/1‑149 (MQ=255)                                                                                                       ccTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAcaggccaaggcacagggcttcgacgccgggcgcttttccttcaacgttgccaagggccggtgcgccaactgcgagggagagggtttcgtcagcgtcgagctgc                                    <  3:263205‑M2/149‑104 (MQ=255)                                                                                                        cTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGc                              >  8:124975/1‑149 (MQ=255)                                                                                                         ttGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAcaggccaaggcacagggcttcgacgccgggcgcttttccttcaacgttgccaagggccggtgcgccaactgcgagggagagggtttcgtcagcgtcgagctgctg                                  <  8:3102‑M2/149‑106 (MQ=255)                                                                                                           ggCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGcc                             <  5:275978/147‑1 (MQ=255)                                                                                                              cTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAAcaggccaaggcacagggcttcgacgccgggcgcttttccttcaacgttgccaagggccggtgcgccaactgcgagggagagggtttcgtcagcgtcgagctgctgttcat                             <  5:54981‑M2/149‑111 (MQ=255)                                                                                                                 cTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTgg                     >  3:99280/1‑149 (MQ=255)                                                                                                                  tCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACg                                  <  2:129942/135‑1 (MQ=255)                                                                                                                  tCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACg                                  >  1:129942/1‑135 (MQ=255)                                                                                                                    ggTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGGCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTc                   <  4:208183/148‑1 (MQ=255)                                                                                                                    ggTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGt                    <  4:99280/147‑1 (MQ=255)                                                                                                                        gCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGtt               <  2:143641/148‑1 (MQ=255)                                                                                                                           gcgAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGTTCAgg           <  3:328287/149‑1 (MQ=255)                                                                                                                              aaGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCGCCTGCGGCCGATCGGTCCCTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGTTCAg            <  1:107729/149‑1 (MQ=255)                                                                                                                                      gcgcACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑c                                                                                     <  4:144327/64‑1 (MQ=255)                                                                                                                                      gcgcACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑c                                                                                     >  3:144327/1‑64 (MQ=255)                                                                                                                                                   aa‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGTTCAGGTTCGTCTTc  <  6:190188/134‑1 (MQ=255)                                                                                                                                                   aa‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGTTCAGGTTCGTCTTc  >  5:190188/1‑134 (MQ=255)                                                                                                                                                    a‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAg                                               >  4:108676/1‑88 (MQ=255)                                                                                                                                                    a‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAg                                               <  3:108676/88‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                          GCATGAACAGCAGCTCGACGCTGACGAAACCCTCTCCCTCGCAGTTGGCGCACCGGCCCTTGGCAACGTTGAAGGAAAAGCGCCCGGCGTCGAAGCCCTGTGCCTTGGCCTGCTCGGTAGCCGCGAAGCATTTGCGCACGTGGTCGAA‑CAGGCCTGTGTAGGTGGCCAGGTTGGAGCGCGGCG‑‑TGCGGCCGATCGG‑‑CTTCTGGTCAACCTGCACCAGCCGCTTGATGCTGCCAAGCCCGGCGCTTACGTGGCCGCTGCTGGTCTGTTCAGGTTCGTCTTC  >  NC_002947/3474750‑3475029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.