| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3572354 = | 48 (0.890) | 4 (0.080) | 4/246 | NT | 8.2% | coding (390/444 nt) | PP_3153 | hypothetical protein |
| ? | NC_002947 | 3572384 = | 44 (0.860) | coding (420/444 nt) | PP_3153 | hypothetical protein | |||||
AATCACTTGGTAAAGATGTGCCTGCCGGGCACAGGAATTCGCGAGGCGTGACCTGACCCCAGGCAGGAGCACAGGCGTACTCCTGCCCGACTTTTCATCAACGCCAGTTAAGGTTAACGGTCGTGGGCGCCTTGCCCGTGACGGTCGCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3572505‑3572354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccacGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAAGTGATTTAGCCAATAGTGGCAATACACTT > NC_002947/3572384‑3572528 AATCACTTGGTAAAGATGTGCCTGCCGGGCACAGGAATTCGCGAGGCGTGACCTGACCCCAGGCAGGAGCACAGGCGTACTCCTGCCCGACTTTTCATCAACGCCAGTTAAGGTTAACGGTCGTGGGCGCCTTGCCCGTGACGGTCGCC > 3:325387/1‑149 TCACTTGGTAAAGATGTGCCTGCCGGGCACAGGAATTCGCGAGGCGTGACCTGACCCCAGGCAGGAGCACAGGCGTACTCCTGCCCGACTTTTCATCAACGCCAGTTAAGGTTAACGGTCGTGGGCGCCTTGCCCGTGACGGTCGCCCA > 6:89542/1‑149 GTTAACGGTCGTGGGCGCCTTGCCCGTGACGGTCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCT > 7:136423/1‑149 ACGGTCGTGGGCGCCTTGCCCGTGACGGTCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTA < 8:136423/148‑1 TCGTGGGCGCCTTGCCCGTGACGGTCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAG > 1:160438/1‑102 TCGTGGGCGCCTTGCCCGTGACGGTCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAG < 2:160438/102‑1 CCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAAGTGATTTAGCCAATAGTGGCAATACACTT < 5:251926/149‑1 ACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAAGTGATTTAGCCAATAGTGGC < 3:208364/138‑1 ACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGACACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAAGTGATTTAGCCAATAGTGGC > 4:208364/1‑138 AATCACTTGGTAAAGATGTGCCTGCCGGGCACAGGAATTCGCGAGGCGTGACCTGACCCCAGGCAGGAGCACAGGCGTACTCCTGCCCGACTTTTCATCAACGCCAGTTAAGGTTAACGGTCGTGGGCGCCTTGCCCGTGACGGTCGCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3572505‑3572354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccacGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAAGTGATTTAGCCAATAGTGGCAATACACTT > NC_002947/3572384‑3572528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |