| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3572354 = | 48 (0.890) | 4 (0.080) | 4/246 | NT | 8.2% | coding (390/444 nt) | PP_3153 | hypothetical protein |
| ? | NC_002947 | 3572384 = | 44 (0.860) | coding (420/444 nt) | PP_3153 | hypothetical protein | |||||
GTTCCAGAGCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAA > NC_002947/3572207‑3572499 | gTTCCAGAGCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGt > 5:94282/1‑149 (MQ=255) aagtgtattgccactattggctaaatcacttggtaaagatgtgcctgccgggcacaggaattcgcgaggcgtgacctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGTgg < 5:251926‑M1/4‑1 (MQ=255) cAGAGCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTggg < 2:70344/148‑1 (MQ=255) cAGAGCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGc > 4:291094/1‑149 (MQ=255) agCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGAc < 4:319961/149‑1 (MQ=255) agCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGAc < 4:314956/149‑1 (MQ=255) gccactattggctaaatcacttggtaaagatgtgcctgccgggcacaggaattcgcgaggcgtgtcctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGt > 4:208364‑M1/137‑138 (MQ=255) gccactattggctaaatcacttggtaaagatgtgcctgccgggcacaggaattcgcgaggcgtgacctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGt < 3:208364‑M1/2‑1 (MQ=255) ggCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCa > 3:162897/1‑149 (MQ=255) tCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTggg < 7:293327/126‑1 (MQ=255) tCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTggg > 8:293327/1‑126 (MQ=255) ccAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCTCCCa > 4:176256/1‑149 (MQ=255) ccAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCa > 7:82421/1‑149 (MQ=255) aTGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGAcc < 8:82421/149‑1 (MQ=255) tGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCg < 1:22608/149‑1 (MQ=255) taaagatgtgcctgccgggcacaggaattcgcgaggcgtgacctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGt < 8:136423‑M1/36‑1 (MQ=255) ccAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGtt > 3:168022/1‑148 (MQ=255) cAGGGCCAGCACGTACTCACTGTCAGCGATGCCCGGCCGCAGCTCTAAGTCCAATTGCATACCGCCAAAAACAAGGACATTGGCAATGCCAAAGCCCAGGCAGTGCAGCAGTGGGCGACCGTCACGTGCAAGGCGACCACGACCGATa > 6:8468/1‑148 (MQ=255) agatgtgcctgccgggcacaggaattcgcgaggcgtgacctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAAc > 7:136423‑M1/110‑149 (MQ=255) aGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAAc < 6:94282/149‑1 (MQ=255) aGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAAc > 2:192137/1‑149 (MQ=255) aGGGCCAGCCCGTACTAAGTGGCAGCGATCCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAAc < 2:315658/149‑1 (MQ=255) ggCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCt > 3:192350/1‑149 (MQ=255) cAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTa > 7:235402/1‑148 (MQ=255) gCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACt > 3:316516/1‑149 (MQ=255) cccGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTg < 8:105993/149‑1 (MQ=255) aCTAAGTGTAAGCGATGCCTGGCGGTTGCTTTATGTGCATTTGGCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCAAGGAAGTGAAGCAGTGGGCGACCGTCACGGGAAAGGCGCCCACGACCGTTAACCTTAACTGGCg < 3:176256/147‑1 (MQ=255) tCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGTCCGTTAACCTTAACTGGc < 6:84935/144‑1 (MQ=255) tCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGc > 5:84935/1‑144 (MQ=255) tgggtCAGCTATGCCGGGCCGCTCCTGTATGTCCAATGGCCTCCCGGAAAATACACGGTATTTGGAAATGCCAAAGCCCCGGATGTGCTGCCG‑GGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTtgat < 4:64233/144‑1 (MQ=255) aGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTtgat < 3:291094/148‑1 (MQ=255) tgtCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTtgatga > 4:325387/1‑148 (MQ=255) gCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTc < 4:162897/149‑1 (MQ=255) ttGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGGGGGCTACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCggg < 1:335141/148‑1 (MQ=255) aTGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCggg < 4:192350/149‑1 (MQ=255) ccGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCa < 3:125902/148‑1 (MQ=255) ccGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAg < 1:192137/149‑1 (MQ=255) ccGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAg > 7:58562/1‑149 (MQ=255) ctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGTGGGCGACCGTCACGGGCAAGGCGCCCACGa > 1:160438‑M1/71‑102 (MQ=255) ctgaccccaggcaggagcacaggcgtactcctgcccgacttttcatcaacgccagttaaggttaacggtcGTGGGCGACCGTCACGGGCAAGGCGCCCACGa < 2:160438‑M1/32‑1 (MQ=255) ctgTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCtg > 8:122072/1‑149 (MQ=255) tgtgCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCg > 6:43295/1‑128 (MQ=255) tgtgCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTc > 6:30196/1‑149 (MQ=255) tgtgCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTc > 6:251926/1‑149 (MQ=255) gCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTcctg > 5:89542/1‑149 (MQ=255) aaaTTGCCTCCCGGAAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTtgat < 8:282958/114‑1 (MQ=255) aaTTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCAGGCAGGAGCACAGGCGTACTcctgcc < 4:168022/149‑1 (MQ=255) cTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTaa > 3:124583/1‑97 (MQ=255) cTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTaa < 4:124583/97‑1 (MQ=255) aaGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTcg > 2:105580/1‑149 (MQ=255) aGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTcgc < 8:58562/149‑1 (MQ=255) aTTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAAt < 8:235402/148‑1 (MQ=255) ttGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTc < 1:105580/149‑1 (MQ=255) ggCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTcc < 4:316516/148‑1 (MQ=255) gCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGc < 7:323955/107‑1 (MQ=255) gCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGc > 8:323955/1‑107 (MQ=255) cgaaGGGCTGGCAGTGCAGCAGTGTGCGACCGTCAGGGGCAAGGCGCCCACGACCGTTAACCTTAAGTGGCGTTGATGATTAGTCGGGGAGGAGTACGCCTGTGGTCCTGCCTGGGGTCAGGTCTCGCCTCGCTAATTGCTGTGgcctg < 8:101090/147‑3 (MQ=255) ccAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCgg > 8:69144/1‑149 (MQ=255) aaGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCggca < 5:8468/149‑1 (MQ=255) agcagTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTAcc > 8:86472/1‑148 (MQ=255) gcagTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCaa < 7:69144/149‑1 (MQ=255) | GTTCCAGAGCGGGGCTACCGTCGATATCCAGAATGCCCAGGGCCAGCCCGTACTCAGTGTCAGCGATGCCGGGCCGCTGCTGTATGTGCAATTGCCTCCCGGCAAATACAAGGTCATTGGCAATGCCCAAGGCCAGGCAGTGCAGCAGTGGGCGACCGTCACGGGCAAGGCGCCCACGACCGTTAACCTTAACTGGCGTTGATGAAAAGTCGGGCAGGAGTACGCCTGTGCTCCTGCCTGGGGTCAGGTCACGCCTCGCGAATTCCTGTGCCCGGCAGGCACATCTTTACCAA > NC_002947/3572207‑3572499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |