| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3951082 = | 18 (0.330) | 4 (0.070) | 4/260 | NT | 8.1% | intergenic (‑46/+149) | PP_3486/PP_3487 | cytochrome c/hypothetical protein |
| ? | NC_002947 | = 5887082 | 73 (1.350) | intergenic (‑67/‑63) | PP_5161/PP_5162 | lysophospholipase/hypothetical protein | |||||
TCGCGATAAGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3951167‑3951082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCTGTGGGAGCGGCCTTGCGTCGCGAAA < NC_002947/5887082‑5887054 TCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAA > 3:254688/1‑115TCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAA < 4:254688/115‑1 GCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGCCCTGTGGGAGCGGCCTTGCGTCG > 3:44254/1‑74 GCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGCCCTGTGGGAGCGGCCTTGCGTCG < 4:44254/74‑1 TCGCGATAAGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3951167‑3951082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCTGTGGGAGCGGCCTTGCGTCGCGAAA < NC_002947/5887082‑5887054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |