New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3951082 =	18 (0.330)	4 (0.070)	4/260	NT	8.1%	intergenic (‑46/+149)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 5887082	73 (1.350)					intergenic (‑67/‑63)	PP_5161/PP_5162	lysophospholipase/hypothetical protein

TCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACAGCGCCTT  >  NC_002947/5886940‑5887230                                                                                                                                                 |                                                                                                                                                     tCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGgc                                                                                                                                                >  2:266980/1‑149 (MQ=255) tCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGgc                                                                                                                                                <  2:281132/149‑1 (MQ=255)     gTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATc                                                                                                                                                   >  5:264115/1‑142 (MQ=255)     gTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATc                                                                                                                                                   <  6:264115/142‑1 (MQ=255)         aTCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGATCACCTCGAACAACAAGC‑ATCGAACTAATTGCGGGAGCGGACTTTCGCGACGCAAGGCCGCTACCAC‑AGGTATCGGCGCCAGCtt                                                                                                                                        >  4:252627/1‑149 (MQ=255)          tCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCttt                                                                                                                                       <  1:194253/149‑1 (MQ=255)           ccACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑Aggg                                                                                                                                                      <  7:103342/133‑1 (MQ=255)           ccACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑Aggg                                                                                                                                                      >  8:103342/1‑133 (MQ=255)               aTTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGa                                                                                                                                   >  5:213060/1‑148 (MQ=255)                        aGTATT‑ATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGc                                                                                                                           >  6:279008/1‑146 (MQ=255)                            ttGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGCTCGGCGCCAGCTTTTAGAAATTGAGCAAGa                                                                                                                       >  6:245517/1‑147 (MQ=255)                               aTCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCTCCAGCTTTTAGAAATTGAGCAAGAAAGtt                                                                                                                  >  2:342015/1‑149 (MQ=255)                                  tGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCt                                                                                                               >  2:339663/1‑149 (MQ=255)                                  tGGAATCTTCAGCTCTGACCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCtttt                                                                                                                                      <  7:91952/126‑1 (MQ=255)                                  tGGAATCTTCAGCTCTGACCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCtttt                                                                                                                                      >  8:91952/1‑126 (MQ=255)                                   ggAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGATCCCTG‑TGGGAGCGgcct                                                                                                                                              >  4:159182/1‑115 (MQ=255)                                   ggAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGATCCCTG‑TGGGAGCGgcct                                                                                                                                              <  3:159182/117‑3 (MQ=255)                                    gAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCtt                                                                                                              <  1:127152/148‑1 (MQ=255)                                    gAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTAACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGCATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTc                                                                                                             >  2:108694/1‑149 (MQ=255)                                       tcttctGCTCTGGCCGGCGCCATGGCAAGCTTGCTCTCCTCGAACAACCAGC‑ATCGATCTAATTGCGGGAGCGTCCTTTCGGGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCTGCTTTTAGAAATTGAGCAAGACAGTTGCTTCca                                                                                                           <  2:235738/148‑1 (MQ=37)                                             gCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGCAAACGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCAAC‑AGGGAACGGCGCCAGCTTTTAGAAATTGAGAAAGACAGTTGCTTCCACAAggg                                                                                                     >  1:81818/1‑149 (MQ=37)                                             gCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGc                                                                                                    <  5:279008/149‑1 (MQ=255)                                                   gCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCACTAGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCAc                                                                                                 <  1:266980/147‑1 (MQ=255)                                                   gCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGa                                                                                              >  1:98227/1‑149 (MQ=255)                                                     cGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGAct                                                                                            >  3:296359/1‑149 (MQ=255)                                                         gcCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCACAC‑AGGGATCGGCGCCAGATTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTc                                                                                        <  1:342015/149‑1 (MQ=255)                                                             tGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGa                                                                                    <  6:213060/149‑1 (MQ=255)                                                                  aGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTACCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGc                                                                               >  2:210864/1‑149 (MQ=255)                                                                   gCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCtt                                                                                                                                        >  5:126923/1‑91 (MQ=255)                                                                   gCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCtt                                                                                                                                        <  6:126923/91‑1 (MQ=255)                                                                         tCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatca                                                                        >  7:255643/1‑149 (MQ=255)                                                                           aCCTCGAACAACCAGC‑ATCGACCTAATTGAGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGTCTCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatca                                                                        <  6:228915/147‑1 (MQ=255)                                                                           aCCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcatc                                                                      <  8:255643/149‑1 (MQ=255)                                                                           aCCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcat                                                                       >  3:3589/1‑148 (MQ=255)                                                                           aCCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcat                                                                       >  7:62946/1‑148 (MQ=255)                                                                             cTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAgg                                                                                                      <  7:325155/115‑1 (MQ=255)                                                                             cTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAgg                                                                                                      >  8:325155/1‑115 (MQ=255)                                                                             cTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAAtcatca                                                                     >  7:239011/1‑148 (MQ=255)                                                                                gAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAAcc                                                                 >  5:242074/1‑149 (MQ=255)                                                                                       cAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgtg                                                           >  7:136383/1‑148 (MQ=255)                                                                                       cAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgtg                                                           >  1:215379/1‑148 (MQ=255)                                                                                       cAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgtg                                                           >  2:165565/1‑148 (MQ=255)                                                                                       cAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgtg                                                           >  8:89954/1‑148 (MQ=255)                                                                                               gAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑ATGGATCTGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTc                                                    <  1:108694/148‑1 (MQ=255)                                                                                                aaCTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCAt                                                  >  8:125999/1‑149 (MQ=255)                                                                                                aaCTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCAt                                                  >  4:73727/1‑149 (MQ=255)                                                                                                aaCTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCAt                                                  >  6:23409/1‑149 (MQ=255)                                                                                                aaCTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGATCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGCTCAt                                                  >  7:91477/1‑149 (MQ=255)                                                                                                     aTTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCt                                             <  8:62946/149‑1 (MQ=255)                                                                                                         cGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttgtt                                         <  7:125999/149‑1 (MQ=255)                                                                                                         cGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttgtt                                         <  2:98227/149‑1 (MQ=255)                                                                                                         cGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCttgt                                          <  8:239011/148‑1 (MQ=255)                                                                                                              gCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGa                                                                                                                             >  4:268798/1‑60 (MQ=255)                                                                                                              gCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGa                                                                                                                             >  4:273443/1‑60 (MQ=255)                                                                                                              gCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCg                                    >  5:195367/1‑149 (MQ=255)                                                                                                                 gCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACATTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcatc                                                                      <  5:113304/112‑1 (MQ=255)                                                                                                                 gCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAatcatc                                                                      >  6:113304/1‑112 (MQ=255)                                                                                                                    tttCGCGACGCAAGGCCGCTCCCAC‑AGGGcttgcgtcgcgaaagggctgcgcagcagccccggcagtggcagctcaagcgcagaaagaggggagcgctgcgcgctcctttcgcga                                                                >  3:254688‑M2/1‑29 (MQ=255)                                                                                                                    tttCGCGACGCAAGGCCGCTCCCAC‑AGGGcttgcgtcgcgaaagggctgcgcagcagccccggcagtggcagctcaagcgcagaaagaggggagcgctgcgcgctcctttcgcga                                                                <  4:254688‑M2/115‑87 (MQ=255)                                                                                                                      tCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGt                             >  7:218905/1‑148 (MQ=255)                                                                                                                        gcgACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAAt                          >  5:111874/1‑149 (MQ=255)                                                                                                                         cgACGCAAGGCCGCTCCCAC‑AGGGcttgcgtcgcgaaagggctgcgcagcagccccggcagtggcagctcaagc                                                                                                    >  3:44254‑M2/1‑24 (MQ=255)                                                                                                                         cgACGCAAGGCCGCTCCCAC‑AGGGcttgcgtcgcgaaagggctgcgcagcagccccggcagtggcagctcaagc                                                                                                    <  4:44254‑M2/74‑51 (MQ=255)                                                                                                                         cgACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgtg                                                           <  6:318203/115‑1 (MQ=255)                                                                                                                         cgACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCtgtg                                                           >  5:318203/1‑115 (MQ=255)                                                                                                                           aCGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCct                       >  2:115486/1‑149 (MQ=255)                                                                                                                             gCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCctct                     >  4:24174/1‑149 (MQ=255)                                                                                                                             gCAACGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATACGCGAATCATCACACCGCTGTGCACGGTCATCGCGTTGTTGGTCGGCGCCGTCATCctct                     >  8:55834/1‑149 (MQ=38)                                                                                                                              cAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTg                    >  2:47409/1‑149 (MQ=255)                                                                                                                              cAAGGCCGCTCCCAC‑AGGGATCGGCGACAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTg                    <  2:81818/149‑1 (MQ=255)                                                                                                                               aaGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTgg                   >  4:298192/1‑149 (MQ=255)                                                                                                                                 ggCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGgcg                                 >  4:298469/1‑133 (MQ=255)                                                                                                                                 ggCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGgcg                                 <  3:298469/133‑1 (MQ=255)                                                                                                                                  gCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGTGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGGACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAg                <  5:245517/149‑1 (MQ=255)                                                                                                                                  gCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAg                >  2:25291/1‑149 (MQ=255)                                                                                                                                  gCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAg                <  6:242074/149‑1 (MQ=255)                                                                                                                                  gCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAg                <  4:296359/149‑1 (MQ=255)                                                                                                                                    cGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGc              <  3:73727/149‑1 (MQ=255)                                                                                                                                         ccAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGGCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTa           >  7:218063/1‑147 (MQ=255)                                                                                                                                         ccAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACa         <  5:23409/149‑1 (MQ=255)                                                                                                                                          cac‑aGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACAg        <  1:25291/149‑1 (MQ=255)                                                                                                                                            acggggATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCCGGCCTACCgc       >  8:2059/4‑149 (MQ=255)                                                                                                                                                ggATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCg                              <  2:157537/122‑1 (MQ=255)                                                                                                                                                ggATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCg                              >  1:157537/1‑122 (MQ=255)                                                                                                                                                ggATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCt            <  6:51048/140‑1 (MQ=255)                                                                                                                                                ggATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCt            >  5:51048/1‑140 (MQ=255)                                                                                                                                                ggATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACAGCGCCt   >  7:45653/1‑149 (MQ=255)                                                                                                                                                 gATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACAGCGCCtt  >  5:60097/1‑149 (MQ=255)                                                                                                                                                 gATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACAGCGCCtt  >  5:32167/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                     TCGGGTACATCCACATTGATGCAAGTATTGATCTGGAATCTTCAGCTCTGGCCGGCGCCATGGCAAGCTTGCTCACCTCGAACAACCAGC‑ATCGAACTAATTGCGGGAGCGGCCTTTCGCGACGCAAGGCCGCTCCCAC‑AGGGATCGGCGCCAGCTTTTAGAAATTGAGCAAGACAGTTGCTTCCACAAGGGCCACCGACTCTTCATGAATAGCCGAATCATCAAACCGCTGTGCACGGTCATCGCCTTGTTGGTCGGCGCCGTAATCCTCTGGCAGGCCTACAGCGCCTT  >  NC_002947/5886940‑5887230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.