New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3999919 =	49 (0.910)	4 (0.080)	4/252	NT	8.3%	coding (604/987 nt)	PP_3528	ABC transporter substrate‑binding protein
	?	NC_002947	3999964 =	41 (0.780)					coding (649/987 nt)	PP_3528	ABC transporter substrate‑binding protein

CTGACCTTGCCCAGCTCGGCAAAGAAGGTTTTCAGCAGAGCACGGTGCTGGTCGGCAAAGCTGGCTGTGGACAGGTAGAAGGTGCGGTTGTTGGACAGGCCGCTGCCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4000067‑3999919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCTTTGCCGAGCTGGGCAAGGTCAGCCAGTGGGCCAACGCCAAGCCTGCCGAAGTGGCCGCGCTGCT  >  NC_002947/3999964‑4000109                                                                                                                                                                                                                                                                                                         CTGACCTTGCCCAGCTCGGCAAAGAAGGTTTTCAGCAGAGCACGGTGCTGGTCGGCAAAGCTGGCTGTGGACAGGTAGAAGGTGCGGTTGTTGGACAGGCCGCTGCCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGC                                                                                                                                                    <  5:24027/149‑1                                                                                                      GCTGCCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGCAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCT                                                                  <  3:209065/130‑1                                                                                                      GCTGCCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGCAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCT                                                                  >  4:209065/1‑130                                                                                                          CCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGCAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCTTTGCCGAGCTGG                                                      >  3:262435/1‑138                                                                                                          CCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGCAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCTTTGCCGAGCTGG                                                      <  4:262435/138‑1                                                                                                                                                   GGCAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCTTTGCCGAGCTGGGCAAGGTCAGCCAGTGGGCCAACGCCAAGCCTGCCGAAGTGGCCGCGCTGCT  <  8:40476/149‑1                                                                                                                                                                                                                                                                                                         CTGACCTTGCCCAGCTCGGCAAAGAAGGTTTTCAGCAGAGCACGGTGCTGGTCGGCAAAGCTGGCTGTGGACAGGTAGAAGGTGCGGTTGTTGGACAGGCCGCTGCCGTCGCGCAGGTTCTTCAGCCCTGGCTGGCTTTCTGCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4000067‑3999919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcAGCGGCCTGTCCAACAACCGCACCTTCTACCTGTCCACAGCCAGCTTTGCCGACCAGCACCGTGCTCTGCTGAAAACCTTCTTTGCCGAGCTGGGCAAGGTCAGCCAGTGGGCCAACGCCAAGCCTGCCGAAGTGGCCGCGCTGCT  >  NC_002947/3999964‑4000109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.