New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4027684 | 37 (0.680) | 5 (0.100) | 5/246 | NT | 11.9% | coding (746/1407 nt) | PP_3552 | two‑component system sensor histidine kinase |
? | NC_002947 | = 4027698 | 39 (0.760) | coding (732/1407 nt) | PP_3552 | two‑component system sensor histidine kinase |
GGCGGCATGGGTGGCCTGCTCGCTGATACGCTGCAGGCCCTGGCCTACCCGCTCGCGCGCCTGGGGATCACGTTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4027533‑4027684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgaGCTGGCCTCGGGCA‑‑TCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCGCGAGCGGGTAGGCCAGGGCCTGCAGCGTATCAGCG < NC_002947/4027698‑4027553 GGCGGCATGGGTGGCCTGCTCGCTGATACGCTGCAGGCCCTGGCCTACCCGCTCGCGCGCCTGGGGATCACGTTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGG < 2:230858/148‑1 CGCTGCAGGCCCTGGCCTACCCGCTCGCGCGCCTGGGGATCACGTTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGAGCTGGCCTCGGGCA‑‑TCGCCCACGA < 6:64795/148‑1 CCGCTCGCGCGCCTGGGGATCACGTTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGG > 5:181856/1‑101 CCGCTCGCGCGCCTGGGGATCACGTTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGG < 6:181856/101‑1 CCAGTGGCTGATTGATCTCGTGGGCGA‑‑TGCCCGAGGCCAGCTCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCGCGAG > 5:276834/1‑142 CCAGTGGCTGATTGATCTCGTGGGCGA‑‑TGCCCGAGGCCAGCTCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCGCGAG < 6:276834/142‑1 CTGATTGATCTCGTGGGCGA‑‑TGCCCGAGGCCAGCTCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCACGAGCGGG > 1:264183/1‑139 CTGATTGATCTCGTGGGCGA‑‑TGCCCGAGGCCAGCTCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCACGAGCGGG < 2:264183/139‑1 GCGAGCTGGCCTCGGGCA‑‑TCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCGCGAGCGGGTAAGCCAGGGCCTGCAGCGTATCAGC > 2:83712/1‑149 CGAGCTGGCCTCGGGCA‑‑TCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCGCGAGCGGGTAGGCCAGGGCCTGCAGCGTATCAGCG < 1:229761/149‑1 GGCGGCATGGGTGGCCTGCTCGCTGATACGCTGCAGGCCCTGGCCTACCCGCTCGCGCGCCTGGGGATCACGTTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4027533‑4027684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgaGCTGGCCTCGGGCA‑‑TCGCCCACGAGATCAATCAGCCACTGGCCGCGGTGGTCAACTATGCCAACGCCAGTCAGCGTTACCTGCAGGGCCTGGAACGTGATCCCCAGGCGCGCGAGCGGGTAGGCCAGGGCCTGCAGCGTATCAGCG < NC_002947/4027698‑4027553 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |