New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4046537	66 (1.220)	4 (0.080)	4/244	NT	5.9%	coding (183/906 nt)	PP_3567	LysR family transcriptional regulator
	?	NC_002947	= 4046580	66 (1.300)					coding (140/906 nt)	PP_3567	LysR family transcriptional regulator

GGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4046410‑4046537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgccaCCTTGCTCAACCGCTCGACGCGCCAGGTCAGCCTGACCGAGGCTGGCGCCCGTTACTACCAGCGGGCACGGGGCATTTTTGAAGCACTGGACGAGGCGGATGCCAGCATCGCCGATCGCGGCGAGGAGCCTGTGGGTGTA  <  NC_002947/4046580‑4046441                                                                                                                                                                                                                                                                              GGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCACCTTGCTCAACCGCTCGACGC                                                                                                                         >  1:217955/1‑149                GCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGG                                                                                                                                                   >  1:304615/1‑108                GCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGG                                                                                                                                                   <  2:304615/108‑1                               GTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCACCTTGCTCAACCGCTCGACGCGCCAGGTCAGCCTGACCGAGGCTGGCGCCC                                                                                           <  2:217955/149‑1                                   ACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCACCTTGCTCAACCGCTCGACGCGCCAGGTCAGCCTGACCGAGGCTGGCGCC                                                                                            <  5:118567/144‑1                                   ACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCACCTTGCTCAACCGCTCGACGCGCCAGGTCAGCCTGACCGAGGCTGGCGCC                                                                                            >  6:118567/1‑144                                                                                                                          GGCGCCACCTTGCTCAACCGCTCGACGCGCCAGGTCAGCCTGACCGAGGCTGGCGCCCGTTACTACCAGCGGGCACGGGGCATTTTTGAAGCACTGGACGAGGCGGATGCCAGCATCGCCGATCGCGGCGAGGAGCCTGTGGGTGTA  <  5:63908/147‑1                                                                                                                                                                                                                                                                              GGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCAGTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4046410‑4046537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgccaCCTTGCTCAACCGCTCGACGCGCCAGGTCAGCCTGACCGAGGCTGGCGCCCGTTACTACCAGCGGGCACGGGGCATTTTTGAAGCACTGGACGAGGCGGATGCCAGCATCGCCGATCGCGGCGAGGAGCCTGTGGGTGTA  <  NC_002947/4046580‑4046441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.