New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4046537	66 (1.220)	4 (0.080)	4/244	NT	5.9%	coding (183/906 nt)	PP_3567	LysR family transcriptional regulator
	?	NC_002947	= 4046580	66 (1.300)					coding (140/906 nt)	PP_3567	LysR family transcriptional regulator

GCGATGACCCGCCGGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCATCGACAGTG  >  NC_002947/4046397‑4046684                                                                                                                                               |                                                                                                                                                    gCGATGACCCGCCGGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGt                                                                                                                                             >  7:70193/1‑149 (MQ=255)  cGATGACCCGCCGGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTc                                                                                                                                            <  8:70193/149‑1 (MQ=255)       aCCCGCCGGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGc                                                                                                                                        <  4:291304/148‑1 (MQ=255)           gccggccgAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGAcc                                                                                                                                   >  6:101602/1‑149 (MQ=255)              ggccgAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAccttgctcaaccgctcgacgc                                                                                                                                >  1:217955‑M1/1‑128 (MQ=255)               gccgAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGgc                                                                                                                               <  2:191370/149‑1 (MQ=255)                 cgAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGgcgc                                                                                                                             >  2:63697/1‑149 (MQ=255)                 cgAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGgcgc                                                                                                                             >  1:230039/1‑149 (MQ=255)                  gAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGACCGCTGGAAGTAACAGGCGCCAGCATCGGTCAGGCTGACATGGcgcg                                                                                                                            >  4:193338/1‑149 (MQ=255)                      tCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGAcc                                                                                                                                   <  3:221650/138‑1 (MQ=255)                      tCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGAcc                                                                                                                                   >  4:221650/1‑138 (MQ=255)                       ccACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTAAAAGGTGCTTCAAAAAAGCCCCGTGCCCGCTGGAAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCg                                                                                                                         >  1:107155/1‑149 (MQ=255)                        cACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGc                                                                                                                      >  2:119460/1‑149 (MQ=255)                               aGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAg                                                                                                               <  2:230039/149‑1 (MQ=255)                                            gTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAccttgctcaaccgctcgacgcgccaggtcagcctgaccgaggctggcgccc                                                                                                  <  2:217955‑M1/149‑52 (MQ=255)                                             tACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGtggcgcc                                                                                                   <  5:63908‑M2/147‑8 (MQ=255)                                                acCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAccttgctcaaccgctcgacgcgccaggtcagcctgaccgaggctggcgcc                                                                                                   <  5:118567‑M1/144‑51 (MQ=255)                                                acCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAccttgctcaaccgctcgacgcgccaggtcagcctgaccgaggctggcgcc                                                                                                   >  6:118567‑M1/1‑94 (MQ=255)                                                acCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCg                                                                                              <  6:283168/149‑1 (MQ=255)                                                  ccACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGAc                                                                                            >  2:156611/1‑149 (MQ=255)                                                  ccACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGAc                                                                                            >  7:174895/1‑149 (MQ=255)                                                  ccACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGAc                                                                                            >  4:179816/1‑149 (MQ=255)                                                  ccACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGAc                                                                                            >  4:136677/1‑149 (MQ=255)                                                  ccACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGAc                                                                                            >  3:250284/1‑149 (MQ=255)                                                  ccACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGAc                                                                                            >  1:172831/1‑149 (MQ=255)                                                          tcctcGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAg                                                                                    >  8:73878/1‑149 (MQ=255)                                                           cctcGCCGCGTTCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAgg                                                                                   <  2:107155/149‑1 (MQ=255)                                                             tcGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAggg                                                                                  >  8:184554/1‑148 (MQ=255)                                                               gccgcGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCAt                                                                               >  8:189708/1‑149 (MQ=255)                                                               gccgcGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCAt                                                                               >  3:88080/1‑149 (MQ=255)                                                               gccgcGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCAt                                                                               <  5:101602/149‑1 (MQ=255)                                                                 cgcgATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATc                                                                              >  3:268239/1‑148 (MQ=255)                                                                 cgcaATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATc                                                                              >  4:243506/1‑148 (MQ=255)                                                                   cgATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGAc                                                                           <  1:119460/149‑1 (MQ=255)                                                                   cgATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGAc                                                                           <  1:156611/149‑1 (MQ=255)                                                                     aTCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGgc                                                                                                                               >  2:304765/1‑95 (MQ=255)                                                                     aTCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGgc                                                                                                                               <  1:304765/95‑1 (MQ=255)                                                                        ggCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGa                                                                       <  3:179816/148‑1 (MQ=255)                                                                         gCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCAGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACg                                                                     >  1:257995/1‑149 (MQ=255)                                                                          cGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACgt                                                                    <  7:73878/149‑1 (MQ=255)                                                                            aTGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACgtgt                                                                  <  4:250284/149‑1 (MQ=255)                                                                            aTGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACgtgt                                                                  >  1:200271/1‑149 (MQ=255)                                                                                 ggCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCAcc                                                              >  3:36183/1‑148 (MQ=255)                                                                                  gCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTTGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACcga                                                            >  1:304279/1‑149 (MQ=255)                                                                                   cATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCTGCGACGCTTCCAGGGCATCGACCAGACGTGTCACcgac                                                           >  7:123276/1‑149 (MQ=255)                                                                                   cATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACcgac                                                           <  3:193338/149‑1 (MQ=255)                                                                                   cATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACcgac                                                           <  7:16243/149‑1 (MQ=255)                                                                                       cGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATg                                                       <  4:36183/149‑1 (MQ=255)                                                                                        gCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAgg                                                                                   >  4:293783/1‑120 (MQ=255)                                                                                        gCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAgg                                                                                   <  3:293783/120‑1 (MQ=255)                                                                                          cTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCg                                                    <  2:200271/149‑1 (MQ=255)                                                                                                    gTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGAc                                                                           <  4:258045/118‑1 (MQ=255)                                                                                                    gTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGAc                                                                           >  3:258045/1‑118 (MQ=255)                                                                                                    gTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGccc                                             >  8:269944/1‑148 (MQ=255)                                                                                                        ttCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGcc                                        >  3:251896/1‑149 (MQ=255)                                                                                                           aaaaaTGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTgc                                     >  6:193694/1‑149 (MQ=255)                                                                                                                  ccccGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCTGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCgg                               <  8:123276/148‑1 (MQ=255)                                                                                                                  ccccGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCgg                               <  8:174895/148‑1 (MQ=255)                                                                                                                  ccccGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCgg                               <  3:243506/148‑1 (MQ=255)                                                                                                                    ccGTGCCCGCTGGTAGTAACGGGCGCCAGACTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGgcag                            >  2:192455/1‑149 (MQ=255)                                                                                                                           cGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGaaaa                     <  4:268239/149‑1 (MQ=255)                                                                                                                                gtagtaACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCtt                >  8:103901/1‑149 (MQ=255)                                                                                                                                 tagtaACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAACAGCCTTg               >  8:290177/1‑149 (MQ=255)                                                                                                                                 tagtaACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTg               <  7:103901/149‑1 (MQ=255)                                                                                                                                 tagtaACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTg               <  7:184554/149‑1 (MQ=255)                                                                                                                                  agtaACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCTGCAGAAAAGGCTTg               <  2:172831/148‑1 (MQ=255)                                                                                                                                    taACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGc                                         >  6:16433/1‑120 (MQ=255)                                                                                                                                    taACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGc                                         <  5:16433/120‑1 (MQ=255)                                                                                                                                      aCGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCAt          <  2:257995/149‑1 (MQ=255)                                                                                                                                       cGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCATc         <  7:269944/149‑1 (MQ=255)                                                                                                                                        gggCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGtggcgcccgttactaccagcgggcacggggcatttttgaagcactggacgaggcggatgccagcatcgccgatcgcggcgaggagcctgtgggtgtac        <  2:217955‑M2/149‑99 (MQ=255)                                                                                                                                         ggCGCCAccttgctcaaccgctcgacgcgccaggtcagcctgaccgaggctggcgcccgttactaccagcgggcacggggcatttttgaagcactggacgaggcggatgccagcatcgccgatcgcggcgaggagcctgtgggtgta         <  5:63908‑M1/147‑141 (MQ=255)                                                                                                                                         ggCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGtggcgcccgttactaccagcgggcacggggcatttttgaagcactggacgaggcggatgccagcatcgccgatcgcggcgaggagcctgtgggt            >  6:118567‑M2/1‑50 (MQ=255)                                                                                                                                         ggCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGtggcgcccgttactaccagcgggcacggggcatttttgaagcactggacgaggcggatgccagcatcgccgatcgcggcgaggagcctgtgggt            <  5:118567‑M2/144‑95 (MQ=255)                                                                                                                                         ggCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCATCGa       <  2:304279/149‑1 (MQ=255)                                                                                                                                              cAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCATCGACAGTg  >  1:335625/1‑149 (MQ=255)                                                                                                                                              cAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCATCGACAGTg  <  5:14015/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    GCGATGACCCGCCGGCCGAACTCCACTGGCAGGCTCAGGCGCAGTACACCCACAGGCTCCTCGCCGCGATCGGCGATGCTGGCATCCGCCTCGTCCA‑‑GTGCTTCAAAAATGCCCCGTGCCCGCTGGTAGTAACGGGCGCCAGCCTCGGTCAGGCTGACCTGGCGCGTCGAGCGGTTGAGCAAGGTGGCGCCCAGCGACGCTTCCAGGGCATCGACCAGACGTGTCACCGACGATGTCGCCAGCCCTAGCCTGCGCGCGGCAGCAGAAAAGCCTTGGGCATCGACAGTG  >  NC_002947/4046397‑4046684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.