New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4344235 | 49 (0.910) | 6 (0.120) | 6/248 | NT | 11.8% | coding (1115/1149 nt) | PP_3817 | polyamine ABC transporter ATP‑binding protein |
? | NC_002947 | = 4344251 | 43 (0.830) | coding (1131/1149 nt) | PP_3817 | polyamine ABC transporter ATP‑binding protein |
TGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4344082‑4344235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaCTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGT‑CTGCCACTGCCCAACGCACCTTCACGCTGTCGCCCGGCTGCATCGGCATGCCCGCCGCCGACAGTGCCTTCACGGTCAGCTCGGTACCCCCTGCAGTCACCAC < NC_002947/4344251‑4344105 TGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGG > 2:76984/1‑149 GGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGG > 7:119842/1‑149 GGTGAAAGCCAGACCTGCCATGTGGTGACTGTAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGC > 5:22281/1‑149 GTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCC < 7:263372/149‑1 TGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCC > 4:46227/1‑148 AAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCC > 8:267757/1‑146 CGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGC < 7:313938/144‑1 CGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGC > 8:313938/1‑144 GTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCG < 3:28617/129‑1 GTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCG > 4:28617/1‑129 GCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGG < 3:262097/124‑1 GCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGG > 4:262097/1‑124 CGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTGCTGCCACTGCCCAACGCACCTTCACGCTGTCGCCCGGCTGCATCGGCATGCCCGCCGCCGACAGTGCCTTCACGGTCAGCTCGGTACCCCCTGCAGTCAC > 1:76984/1‑148 GACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGT‑CTGCCACTGCCCAACGCACCTTCACGCTGTCGCCCGGCTGCATCGGCATGCCCGCCGCCGACAGTGCCTTCACGGTCAGCTCGGTACCCCCTGCAGTCACCAC < 7:298108/149‑1 TGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4344082‑4344235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaCTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGT‑CTGCCACTGCCCAACGCACCTTCACGCTGTCGCCCGGCTGCATCGGCATGCCCGCCGCCGACAGTGCCTTCACGGTCAGCTCGGTACCCCCTGCAGTCACCAC < NC_002947/4344251‑4344105 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |