New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4417552 | 68 (1.260) | 5 (0.100) | 3/252 | NT | 6.6% | coding (445/552 nt) | PP_3905 | LuxR family transcriptional regulator |
? | NC_002947 | = 4417586 | 75 (1.430) | coding (479/552 nt) | PP_3905 | LuxR family transcriptional regulator |
TGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4417442‑4417552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACCGCATGCATGGCGATGAGGCTGGCAAGCAGGATGCAGAGAGGGCTGATGATCTGGCGACGCATTGCCTCGGCGACCATCGCGGCGCGCCGGGCAACCTTGAGCTTCAGCA < NC_002947/4417586‑4417442 TGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTGATCGCCATGCATGCGGCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACCGC < 3:278735/149‑1 TGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACCGC < 1:39586/149‑1 TGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACCGC < 3:299627/149‑1 TGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACC > 1:330015/1‑144 TGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACC < 2:330015/144‑1 GCGGCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACCGCATGCATGGCGATGAGGCTGGCAAGCAGGATGCAGAGAGGGCTGGTGATCTGGCGACGCATTGCCTCGGCGACCATCGCGGCGCGCCGGGCAACCTTGAGCTTCAGCA > 8:89649/1‑149 TGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4417442‑4417552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCGATCGCGGCGCATGGGGTCGCTGTCGTCGATCACCGCATGCATGGCGATGAGGCTGGCAAGCAGGATGCAGAGAGGGCTGATGATCTGGCGACGCATTGCCTCGGCGACCATCGCGGCGCGCCGGGCAACCTTGAGCTTCAGCA < NC_002947/4417586‑4417442 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |