New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 441755268 (1.260)5 (0.100) 3/252 NT 6.6% coding (445/552 nt) PP_3905 LuxR family transcriptional regulator
?NC_002947 = 4417586 75 (1.430)coding (479/552 nt) PP_3905 LuxR family transcriptional regulator

GCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGC  >  NC_002947/4417438‑4417731
                                                                                                                                                    |                                                                                                                                                 
gCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATcg                                                                                                                                                   >  8:173805/1‑149 (MQ=255)
    tGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCACCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGccgc                                                                                                                                               >  8:89649‑M2/1‑145 (MQ=255)
           gCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGAGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCg                                                                                                                                         >  1:66089/1‑148 (MQ=255)
             tCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAg                                                                                                                                      >  7:43162/1‑149 (MQ=255)
               aaGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAg                                                                                                                                      <  6:285585/147‑1 (MQ=255)
                      cccGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCAcc                                                                                                                             <  8:43162/149‑1 (MQ=255)
                            gcgcCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCaa                                                                                                                       <  3:335238/149‑1 (MQ=255)
                               ccgcGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGtt                                                                                                                    <  8:204333/149‑1 (MQ=255)
                                 gcgATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCg                                                                                                                  <  7:173805/149‑1 (MQ=255)
                                      ggTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCg                                                                                                             >  7:84384/1‑149 (MQ=255)
                                        tCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGtt                                                                                                           <  4:229330/149‑1 (MQ=255)
                                         cGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTc                                                                                                          >  5:244826/1‑149 (MQ=255)
                                          gCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCg                                                                                                         <  6:63885/149‑1 (MQ=255)
                                             gAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGc                                                                                                        >  1:82876/1‑147 (MQ=255)
                                                gCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGc                                                                                                   >  2:270208/1‑149 (MQ=255)
                                                  aaTGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGcc                                                                                                  >  7:307157/1‑148 (MQ=255)
                                                   aTGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGa                                                                                                <  6:137635/149‑1 (MQ=255)
                                                       gTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGc                                                                                             >  8:120582/1‑148 (MQ=255)
                                                          gCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTc                                                                                                                   <  6:346091/123‑1 (MQ=255)
                                                          gCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTc                                                                                                                   >  5:346091/1‑123 (MQ=255)
                                                          gCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCtt                                                                                          <  2:66089/148‑1 (MQ=255)
                                                          gCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTc                                                                                         <  6:244826/149‑1 (MQ=255)
                                                           ccAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGa                                                                                                                 >  2:249079/1‑124 (MQ=255)
                                                           ccAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGa                                                                                                                 <  1:249079/124‑1 (MQ=255)
                                                           ccAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTc                                                                                         >  1:174217/1‑148 (MQ=255)
                                                                tcatcaGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATAc                                                                                   <  2:174217/149‑1 (MQ=255)
                                                                  atcaGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCa                                                                                 >  2:147023/1‑149 (MQ=255)
                                                                   tcaGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCAc                                                                                >  1:265873/1‑149 (MQ=255)
                                                                       cccTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGCCGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCt                                                                            >  4:94435/1‑149 (MQ=255)
                                                                       cccTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGcgccgc                                                                                                                                >  7:10237/1‑97 (MQ=255)
                                                                       cccTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGcgccgc                                                                                                                                <  8:10237/97‑1 (MQ=255)
                                                                       cccTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAg                                                                                               >  4:296056/1‑130 (MQ=255)
                                                                       cccTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAg                                                                                               <  3:296056/130‑1 (MQ=255)
                                                                        ccTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCt                                                                            >  8:318117/1‑148 (MQ=255)
                                                                            tctGCATCCTGCTTGCCAGCCTCATCGCCATCCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGacc                                                                        >  8:300684/1‑148 (MQ=255)
                                                                             ctGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGAGACCCCATGCGCCGCGATAGCCGCGCTCCGGAGCGCCGCACCGCCCAAGATCGAATCGTTCGCAAGTCAGAGGCCTTCGAATACCACGCCTGcccca                                                                      >  3:314384/1‑149 (MQ=21)
                                                                               tcttcgtGCTTGCGAGGCTCATCGCCATGGATGCGGTGATCGACGACAGCGACCCCACGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGacccac                                                                     <  2:333136/142‑1 (MQ=18)
                                                                                 aTCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGCCAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGATTCGGTCGCAAGGCCGAGGCCGTCGAATACCCCGCCTGACCCACCCg                                                                  >  4:243043/1‑149 (MQ=21)
                                                                                   ccTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCACGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCCAATCGTTCGCAACGCCGAGGCCTTCGAAAACCACGCCAGACCCACCAGa                                                                 >  1:333136/1‑148 (MQ=255)
                                                                                    cTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAg                                                                <  7:318117/148‑1 (MQ=255)
                                                                                       cTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATc                                                            <  2:265873/149‑1 (MQ=255)
                                                                                          gCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcacc                                                         >  2:310671/1‑149 (MQ=255)
                                                                                          gCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATca                                                           <  8:307157/147‑1 (MQ=255)
                                                                                          gCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATca                                                           <  4:31782/147‑1 (MQ=255)
                                                                                          gCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATca                                                           <  2:82876/147‑1 (MQ=255)
                                                                                             aGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACAACGCCTGACCCACCCGAGGATCACcaca                                                      >  7:71141/1‑149 (MQ=255)
                                                                                               ccTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATg                                                    <  8:71141/149‑1 (MQ=255)
                                                                                                cTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATg                                                    >  8:83566/1‑148 (MQ=255)
                                                                                                cTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATg                                                    >  5:289971/1‑148 (MQ=255)
                                                                                                cTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGc                                                   <  1:147023/149‑1 (MQ=255)
                                                                                                 tCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTAGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATg                                                    >  4:270356/1‑147 (MQ=255)
                                                                                                   aTCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTc                                                                                                          <  2:201802/91‑1 (MQ=255)
                                                                                                   aTCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTc                                                                                                          >  1:201802/1‑91 (MQ=255)
                                                                                                   aTCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACGACGCCTGACCCACCCGAGGATCACCACATGCAGa                                                <  7:83566/149‑1 (MQ=255)
                                                                                                   aTCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGa                                                <  2:99192/149‑1 (MQ=255)
                                                                                                    tCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGAc                                               <  1:270208/149‑1 (MQ=255)
                                                                                                      gCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATATCACGCCTGACCCCCCCGAGGATCACCACATGCAGACAg                                             >  1:314384/1‑149 (MQ=255)
                                                                                                      gCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATc                                                            <  5:54655/134‑1 (MQ=255)
                                                                                                      gCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATc                                                            >  6:54655/1‑134 (MQ=255)
                                                                                                          tgcatgcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGt                                         <  7:120582/149‑1 (MQ=255)
                                                                                                            catgcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGc                                       <  7:300684/149‑1 (MQ=255)
                                                                                                            catgcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTCCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTg                                        >  2:266253/1‑148 (MQ=255)
                                                                                                               gcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGccgcatgcatggcgatgaggctggcaagcaggatgcagagagggctgatgatctggcgacgcattgcctcggcgaccatcgcggcgcgccgggcaaccttgagcttcagca                                    <  1:39586‑M2/149‑112 (MQ=255)
                                                                                                               gcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGccgcatgcatggcgatgaggctggcaagcaggatgcagagagggctgatgatctggcgacgcattgcctcggcgaccatcgcggcgcgccgggcaaccttgagcttcagca                                    <  3:299627‑M2/149‑112 (MQ=255)
                                                                                                               gcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGccgcatgcatggcgatcaggctggcaagcaggatgcagagagggctgatgatctggcgacgcattgcctcggcgaccatcgcggcgcgccgggcaaccttgagcttcagca                                    <  3:278735‑M2/149‑112 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGccgcatgcatggcgatgaggctggcaagcaggatgcagagagggctgatgatctggcgacgcattgcctcggcgaccatcgcggcgcgccgggcaaccttgagcttca                                       <  2:330015‑M2/144‑109 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGccgcatgcatggcgatgaggctggcaagcaggatgcagagagggctgatgatctggcgacgcattgcctcggcgaccatcgcggcgcgccgggcaaccttgagcttca                                       >  1:330015‑M2/1‑36 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcac                                                          >  1:275024/1‑125 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcac                                                          <  2:270907/125‑1 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcac                                                          >  1:270907/1‑125 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcac                                                          <  2:275024/125‑1 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAg                                                 <  5:146036/134‑1 (MQ=255)
                                                                                                                 ggTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAg                                                 >  6:146036/1‑134 (MQ=255)
                                                                                                                  gTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTCCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAg                                 <  1:266253/149‑1 (MQ=255)
                                                                                                                                cGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCg                                                                  <  3:58176/102‑1 (MQ=255)
                                                                                                                                cGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCg                                                                  >  4:58176/1‑102 (MQ=255)
                                                                                                                                    cccATGCGCCGCGATGGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCa                                                  <  5:203522/114‑1 (MQ=255)
                                                                                                                                    cccATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGaa               <  3:270356/149‑1 (MQ=255)
                                                                                                                                    cccATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGCCCTTCGAAAACCACGCCTGACCAACCCGAGGATCACCACATGCa                                                  >  6:203522/1‑114 (MQ=255)
                                                                                                                                          cgccgcGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGtcc         <  3:94435/149‑3 (MQ=255)
                                                                                                                                              gcgATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGAt                                                             <  6:291867/93‑1 (MQ=255)
                                                                                                                                              gcgATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGAt                                                             >  5:291867/1‑93 (MQ=255)
                                                                                                                                                 aTCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCCCCACATGCAGACAGCCGTGCATAAAGCTTTCGAGTACAAGCGAATGGTGCTCGCAGc  >  8:292546/1‑149 (MQ=255)
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GCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGC  >  NC_002947/4417438‑4417731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.