New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4509677 = | 57 (1.050) | 3 (0.060) | 3/246 | NT | 5.3% | coding (385/1281 nt) | serS | serine‑‑tRNA ligase |
? | NC_002947 | 4509734 = | 54 (1.060) | coding (328/1281 nt) | serS | serine‑‑tRNA ligase |
ATGGCCAACGAACTGGCTGCCGGCAAGGCTGAGCTGGACGCCATTCAGGCCGAGCTGGATGGCATCCTGCTGACCATTCCCAACCTGCCGGACGCCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAACGTCGAAGTGCGCCGTTGGGGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4509830‑4509677 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacgcTGGCGTCCGGCAGGTTGGGAATGGTCAGCAGGATGCCATCCAGCTCGGCCTGAATGGCGTCCAGCTCAGCCTTGCCGGCAGCCAGTTCGTTGGCCATGCGCTCGACGTCAGCCATCAGCGGGGCGATGTCTTCGCCCTTGGCC > NC_002947/4509734‑4509876 ATGGCCAACGAACTGGCTGCCGGCAAGGCTGAGCTGGACGCCATTCAGGCCGAGCTGGATGGCATCCTGCTGACCATTCCCAACCTGCCGGACGCCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAGCGTCGAAGTGCGCCGTTGGGG < 4:227924/149‑1 ATGGCCAACGAACTGGCTGCCGGCAAGGCTGAGCTGGACGCCATTCAGGCCGAGCTGGATGGCATCCTGCTGACCATTCCCAACCTGCCGGACGCCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAGCGTCGAAGTGCGCCGTTGGGG < 7:259192/149‑1 CCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAGCGTCGAAGTGCGCCGTTGGGGCACGCTGGCGTCCGGCAGGTTGGGAATGGTCAGCAGGATGCCATCCAGCTCGGCCTGAATGGCGTCCAGCTCAGCCTTGCCGGCAGCCAGTTCG > 3:32605/1‑149 CGGTCGGCGCCAGTGAAGACGACAACGTCGAAGTGCGCCGTTGGGGCACGCTGGCGTCCGGCAGGTTGGGAATGGTCAGCAGGATGCCATCCAGCTCGGCCTGAATGGCGTCCAGCTCAGCCTTGCCGGCAG > 7:231351/1‑132 CGGTCGGCGCCAGTGAAGACGACAACGTCGAAGTGCGCCGTTGGGGCACGCTGGCGTCCGGCAGGTTGGGAATGGTCAGCAGGATGCCATCCAGCTCGGCCTGAATGGCGTCCAGCTCAGCCTTGCCGGCAG < 8:231351/132‑1 GCACGCTGGCGTCCGGCAGGTTGGGAATGGTCAGCAGGATGCCATCCAGCTCGGCCTGAATGGCGTCCAGCTCAGCCTTGCCGGCAGCCAGTTCGTTGGCCATGCGCTCGACGTCAGCCATCAGCGGGGCGATGTCTTCGCCCTTGGCC < 4:291744/149‑1 ATGGCCAACGAACTGGCTGCCGGCAAGGCTGAGCTGGACGCCATTCAGGCCGAGCTGGATGGCATCCTGCTGACCATTCCCAACCTGCCGGACGCCAGCGTGCCGGTCGGCGCCAGTGAAGACGACAACGTCGAAGTGCGCCGTTGGGGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4509830‑4509677 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcacgcTGGCGTCCGGCAGGTTGGGAATGGTCAGCAGGATGCCATCCAGCTCGGCCTGAATGGCGTCCAGCTCAGCCTTGCCGGCAGCCAGTTCGTTGGCCATGCGCTCGACGTCAGCCATCAGCGGGGCGATGTCTTCGCCCTTGGCC > NC_002947/4509734‑4509876 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |