| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4676734 = | 52 (0.960) | 4 (0.080) | 4/250 | NT | 7.8% | coding (1840/2250 nt) | ldcC | lysine decarboxylase |
| ? | NC_002947 | 4676781 = | 44 (0.850) | coding (1793/2250 nt) | ldcC | lysine decarboxylase | |||||
AAAACGGGCCTGTACAGCTTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4676884‑4676734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAAAACAGTACCAGGAAGCTGTACAGGCCCGTTTTTTCCACCACCAGCCCGCGTTCCCAGAGAAACTTGCTGACTACC > NC_002947/4676781‑4676927 AAAACGGGCCTGTACAGCTTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGC < 7:277433/149‑1 ACAGCTTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTG > 2:243278/1‑135 ACAGCTTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATCACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTG < 1:243278/135‑1 TTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCG < 1:160907/133‑1 TTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCG > 2:160907/1‑133 TATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCGTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAA < 5:184706/124‑1 TATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCGTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAA > 6:184706/1‑124 CAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCGTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAAAACAGTACCAGGAAGCTGTACAGGCCCGTTTTT > 5:168042/1‑149 CACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCGTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAAAACAGTACCAGGAAGCTGTACAGGCCCGTTTTTTCCACCAC < 6:168042/149‑1 CCGTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAAAACAGTACCAGCAAGCTGTACAGGCCCGTTTTTTCCACCACCAGCCCGCGTTCCCAGAGAAACTTGCTGACTAC < 1:2230/149‑1 CGTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAAGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAAAACAGTACCAGGAAGCTGTACAGGCCCGTTTTTTCCACCACCAGCCCGCGTTCCCAGAGAAACTTGCTGACTACC > 2:274301/1‑149 AAAACGGGCCTGTACAGCTTCCTGGTACTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCCTGCTCACCGAGCTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCACTCAGCAGCTGCCTGCCCAGTGTGGGGGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4676884‑4676734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCATAGTGGCGCTTGAACTCCAGCAGCTCGGTGAGCAGGGTGCTCCACTTGCCCTTGGTGATGCCCATGGAAAACAGTACCAGGAAGCTGTACAGGCCCGTTTTTTCCACCACCAGCCCGCGTTCCCAGAGAAACTTGCTGACTACC > NC_002947/4676781‑4676927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |