| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4771307 = | 44 (0.810) | 3 (0.060) | 3/248 | NT | 5.7% | coding (7960/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4771364 = | 57 (1.110) | coding (7903/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
GCGCCCCTGCGTGCGCTGACGCCTCCAGCGCAACAGGCGCCGCTGCTGGTCCACGAGCGCATCGCGCAATGGGCGCAGCAGCAAGGTGATGCCGTGGCGGTCAAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4771457‑4771307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaCGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCTGGCCGTCCAGCGACAGCGC > NC_002947/4771364‑4771511 GCGCCCCTGCGTGCGCTGACGCCTCCAGCGCAACAGGCGCCGCTGCTGGTCCACGAGCGCATCGCGCAATGGGCGCAGCAGCAAGGTGATGCCGTGGCGGTCAAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGC < 5:316282/149‑1 CGCCCCTGCGTGCGCTGACGCCTCCAGCGCAACAGGCGCCGCTGCTGGTCCACGAGCGCATCGCGCAATGGGCGCAGCAGCAAGGTGATGCCGTGGCGGTCAAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGCC < 3:168982/149‑1 TGGCGGTCAAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCA > 5:26534/1‑144 TGGCGGTCAAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCA < 6:26534/144‑1 AAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGG < 1:135648/149‑1 CGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCTGGCCGTCCAGCGA > 8:251388/1‑147 CCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCTGG > 7:213250/1‑134 CCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCTGG < 8:213250/134‑1 CCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCCGGCCGTCCAGCGACAGC > 3:57000/1‑149 ACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCTGGCCGTCCAGCGACAGCGC < 1:210522/149‑1 GCGCCCCTGCGTGCGCTGACGCCTCCAGCGCAACAGGCGCCGCTGCTGGTCCACGAGCGCATCGCGCAATGGGCGCAGCAGCAAGGTGATGCCGTGGCGGTCAAGGTCGATGGGCAAACCCTGAGCTTCGCCGAACTCGACCGCGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4771457‑4771307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccaCGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGGGGCGCGCCGGGCAGCAGCCCGAGGTTGCCCAGGCGCGCCTGGCCGTCCAGCGACAGCGC > NC_002947/4771364‑4771511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |