New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4771307 =	44 (0.810)	3 (0.060)	3/248	NT	5.7%	coding (7960/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4771364 =	57 (1.110)					coding (7903/10413 nt)	pvdD	non‑ribosomal peptide synthetase

GGTACGCCGTGTCGATCGGCACATAGGCTGCGCCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGG  >  NC_002947/4771160‑4771452                                                                                                                                                     |                                                                                                                                                  gcgctgtcgctggacggccaggcgcgcctgggcaacctcgggctgctgcccggcgcgcccctgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgt                                                                                                                                                   <  1:210522‑M1/1‑1 (MQ=255)   gctgtcgctggacggccgggcgcgcctgggcaacctcgggctgctgcccggcgcgcccctgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTgg                                                                                                                                                 >  3:57000‑M1/147‑149 (MQ=255)     cGCCGTGTCGATCGGCACATAGGCTGCGCCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTggcg                                                                                                                                               <  3:282993/148‑1 (MQ=255)       tcgctggacggccaggcgcgcctgggcaacctcgggctgctgcccggcgcgcccctgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTggcg                                                                                                                                               >  8:251388‑M1/143‑147 (MQ=255)               aTCGGCACATAGGCTGCGCCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAg                                                                                                                                    >  7:272915/1‑149 (MQ=255)                  ccaggcgcgcctgggcaacctcgggctgctgcccggcgcgcccctgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTgg                                                                                                                                                 <  8:213250‑M1/3‑1 (MQ=255)                  ccaggcgcgcctgggcaacctcgggctgctgcccggcgcgcccctgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTgg                                                                                                                                                 >  7:213250‑M1/132‑134 (MQ=255)                     acaTAGGCTGCGCCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAACTCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCgg                                                                                                                               <  1:67138/149‑1 (MQ=255)                       aTAGGCTGCGCCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCg                                                                                                                             >  5:279827/1‑148 (MQ=255)                               cgcCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAgg                                                                                                                    <  8:82040/149‑1 (MQ=255)                                     ccTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGc                                                                                                              >  1:117404/1‑149 (MQ=255)                                       ttGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGcc                                                                                                             >  7:136468/1‑148 (MQ=255)                                                 cccggcgcgcccctgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCtt                                                                                                   <  1:135648‑M1/49‑1 (MQ=255)                                                    gcagGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGAcc                                                                                               >  1:221997/1‑149 (MQ=255)                                                           gacgaTCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACgg                                                                                        <  3:86501/149‑1 (MQ=255)                                                              tgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCa                                                                                           <  6:26534‑M1/57‑1 (MQ=255)                                                              tgcgtgcgctgacgcctccagcgcaacaggcgccgctgctggtccacgagcgcatcgcgcaatgggcgcagcagcaaggtgatgccgTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCa                                                                                           >  5:26534‑M1/88‑144 (MQ=255)                                                                  atcTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCAcc                                                                                 >  7:14262/1‑149 (MQ=255)                                                                       tgGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTtg                                                                              <  8:14262/147‑1 (MQ=255)                                                                          ggTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTtgctgct                                                                         <  7:181869/149‑1 (MQ=255)                                                                              cGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTgcg                                                                      <  7:247151/148‑1 (MQ=255)                                                                               gTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGcc                                                                    <  7:25580/149‑1 (MQ=255)                                                                                       gCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTgcgc                                                            >  8:309621/1‑149 (MQ=255)                                                                                         gACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGa                                                          >  8:259804/1‑149 (MQ=255)                                                                                          aCGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGAt                                                         <  7:185776/149‑1 (MQ=255)                                                                                                aCCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTc                                                   >  4:303862/1‑149 (MQ=255)                                                                                                  ccGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTtgctgctgc                                                                       <  4:75857/127‑1 (MQ=255)                                                                                                  ccGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTtgctgctgc                                                                       >  3:75857/1‑127 (MQ=255)                                                                                                  ccGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGt                                                 <  2:117404/149‑1 (MQ=255)                                                                                                  ccGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGt                                                 >  5:16952/1‑149 (MQ=255)                                                                                                      aCTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGAc                                             <  2:221997/149‑1 (MQ=255)                                                                                                        ttCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGAc                                             >  8:102056/1‑147 (MQ=255)                                                                                                                ccACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAgcggc                                   >  3:108297/1‑149 (MQ=255)                                                                                                                ccACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAgcggc                                   <  4:108297/149‑1 (MQ=255)                                                                                                                  aCGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTgc                                                              <  8:77988/120‑1 (MQ=255)                                                                                                                  aCGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTgc                                                              >  7:77988/1‑120 (MQ=255)                                                                                                                    gCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCt                               >  3:289141/1‑149 (MQ=255)                                                                                                                     ccTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTCGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTg                              <  8:272915/149‑1 (MQ=255)                                                                                                                        tCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTg                              >  4:92221/1‑146 (MQ=255)                                                                                                                        tCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTg                              <  3:92221/146‑1 (MQ=255)                                                                                                                          ggCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTgc                          <  8:136468/148‑1 (MQ=255)                                                                                                                            cAA‑TCAGAGCATCGGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCt                       <  4:273294/149‑1 (MQ=255)                                                                                                                                tCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGTGCTg                      >  5:354316/1‑147 (MQ=255)                                                                                                                                tCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGa                    <  6:279827/149‑1 (MQ=255)                                                                                                                                   gagCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGgcgc                                 <  2:255071/133‑1 (MQ=255)                                                                                                                                   gagCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGgcgc                                 >  1:255071/1‑133 (MQ=255)                                                                                                                                      cATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTc              <  7:102056/149‑1 (MQ=255)                                                                                                                                        tgtgCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAg            >  2:327326/1‑149 (MQ=255)                                                                                                                                            ccAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGcgca        <  3:303862/149‑1 (MQ=255)                                                                                                                                             cAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGTGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTTCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGcgcac       >  3:130609/1‑149 (MQ=255)                                                                                                                                             cAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAg            <  8:195978/144‑1 (MQ=255)                                                                                                                                             cAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAg            >  7:195978/1‑144 (MQ=255)                                                                                                                                             cAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGcgcac       >  2:210522/1‑149 (MQ=255)                                                                                                                                                  aaTTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAgg  >  3:8215/1‑149 (MQ=255)                                                                                                                                                   aTTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGcc                                <  5:322597/118‑1 (MQ=255)                                                                                                                                                   aTTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGcc                                >  6:322597/1‑118 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGTACGCCGTGTCGATCGGCACATAGGCTGCGCCAGCCTTGAGCACCGCCAGCAGGGCGACGATCATCTGTGGGGTACGTTGCAAGGCGACGCCCACCCGCACTTCAGGACCCACGCCTTCGGCAA‑TCAGAGCATGTGCCAAGCAATTGGCGGCGCGGTCGAGTTCGGCGAAGCTCAGGGTTTGCCCATCGACCTTGACCGCCACGGCATCACCTTGCTGCTGCGCCCATTGCGCGATGCGCTCGTGGACCAGCAGCGGCGCCTGTTGCGCTGGAGGCGTCAGCGCACGCAGG  >  NC_002947/4771160‑4771452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.