| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4780451 = | 71 (1.310) | 4 (0.080) | 4/250 | NT | 5.9% | coding (6863/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4780484 = | 59 (1.130) | coding (6830/7887 nt) | pvdJ | non‑ribosomal peptide synthetase | |||||
TGCTGCAACAGGTCGAGGCCACGGGCGTGACCATCCTCGAATGCGTACCGGCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4780601‑4780451‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTGGCCTCGACCTGTTGCAGCAGCGCCTGCGGATCCTGCGCCACGGCGTCG > NC_002947/4780484‑4780630 TGCTGCAACAGGTCGAGGCCACGGGCGTGACCATCCTCGAATGCGTACCGGCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGC > 1:78714/1‑149 CTGCAACAGGTCGAGGCCACGGGCGTGACCATCCTCGAATGCGTACCGGCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCG > 5:17775/1‑149 CTGCAACAGGTCGAGGCCACGGGCGTGACCATCCTCGAATGCGTACCGGCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCG > 6:39632/1‑149 GCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCC > 1:37959/1‑97 GCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCC < 2:37959/97‑1 ACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCGGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTGGCCT > 8:268604/1‑149 ACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCGGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTGGCCTCGACCTGT > 7:153578/1‑149 CACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCGGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTG < 7:46391/135‑1 CACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCGGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTG > 8:46391/1‑135 CGGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTGGCCTCGACCTGTTGCAGCAGCGCCTGCGGATCCTGCGCCACGGCGTCG > 4:239198/1‑149 CGGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTGGCCTCGACCTGTTGCAGCAGCGCCTGCGGATCCTGCGCCACGGCGTCG < 8:221917/149‑1 TGCTGCAACAGGTCGAGGCCACGGGCGTGACCATCCTCGAATGCGTACCGGCGATGATCCAGGCCATGCTGGAACTGCCAGCCCGGCAATTGCCACGCCTGCGTTACCTGCTCACCACCGGCGAAGCCATGTCACCGGCACTGGCCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4780601‑4780451‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGTGGTGAGCAGGTAACGCAGGCGTGGCAATTGCCGGGCTGGCAGTTCCAGCATGGCCTGGATCATCGCCGGTACGCATTCGAGGATGGTCACGCCCGTGGCCTCGACCTGTTGCAGCAGCGCCTGCGGATCCTGCGCCACGGCGTCG > NC_002947/4780484‑4780630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |