New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4855936	36 (0.670)	3 (0.060)	3/246	NT	6.0%	coding (715/807 nt)	PP_4270	hypothetical protein
	?	NC_002947	= 4855996	60 (1.170)					coding (775/807 nt)	PP_4270	hypothetical protein

GGGTGCATGGTGCGCAACGATCCGGCGATACCGACACAAGGGCTGTTGCGGGCGTTGGTAAGGATGAAGCAGTCGGGGGAGATAGAGCGGATTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4855840‑4855936 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttgcTGGGTATTTCGGGCCGGGCCACAGACATACTGTCCGGGTCGCCCGTCGCTTCATACCGCTGCAAAATCCGCTCTATCTCCCCCGACTGCTTCATCCTTACCAACGCCCGCAACAGCCCTTGTGTCGGTATCGCCGGATCGTTG  <  NC_002947/4855996‑4855854                                                                                                                                                                                                                                                  GGGTGCATGGTGCGCAACGATCCGGCGATACCGACACAAGGGCTGTTGCGGGCGTTGGTAAGGATGAAGCAGTCGGGGGAGATAGAGCGGATTTTGCTGGGTATTTCGGGCCGGGCCACAGACATACTGTCCGGGTCGCCCGTCGCTT                                                                                              >  3:296025/1‑148                    ATCCGGCGATACCGACACAAGGGCTGTTGCGGGCGTTGGTAAGGATGAAGCAGTCGGGGGAGATAGAGCGGATTTTGCTGGGTATTTCGGGCCGGGCCACAGACATACTGTCCGGGTCGCCCGTCGCTTCATACCGCTGCAAAATCCGC                                                                          <  4:296025/149‑1                       CGGCGATACCGACACAAGGGCTGTTGCGGGCGTTGGTAAGGATGAAGCAGTCGGGGGAGATAGAGCGGATTTTGCTGGGTATTTCGGGCCGGGCCACAGACATACTGTCCGGGTCGCCCGTCGCTTCATACCGCTGCAAAATCCGCTCT                                                                       <  4:232089/149‑1                                                                                            TTTTGCTGGGTATTTCGGGCCGGGCCACAGACATACTGTCCGGGTCGCCCGTCGCTTCATACCGCTGCAAAATCCGCTCTATCTCCCCCGACTGCTTCATCCTTACCAACGCCCGCAACAGCCCTTGTGTCGGTATCGCCGGATCGTTG  <  4:282211/149‑1                                                                                                                                                                                                                                                  GGGTGCATGGTGCGCAACGATCCGGCGATACCGACACAAGGGCTGTTGCGGGCGTTGGTAAGGATGAAGCAGTCGGGGGAGATAGAGCGGATTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4855840‑4855936 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttgcTGGGTATTTCGGGCCGGGCCACAGACATACTGTCCGGGTCGCCCGTCGCTTCATACCGCTGCAAAATCCGCTCTATCTCCCCCGACTGCTTCATCCTTACCAACGCCCGCAACAGCCCTTGTGTCGGTATCGCCGGATCGTTG  <  NC_002947/4855996‑4855854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.