| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5034832 = | 0 (0.000) | 6 (0.120) | 3/250 | NT | 100% | coding (872/1536 nt) | PP_4439 | transposase |
| ? | NC_002947 | 5037821 = | NA (NA) | coding (913/1536 nt) | PP_4443 | transposase | |||||
GATCAAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5034984‑5034832‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCTTTGATCTGCACGTAGCGAACAAAAGTCAGCTGGCCGAACAAG > NC_002947/5037821‑5037968 GATCAAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTT < 8:60766/149‑1 ATCAAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTG > 2:170546/1‑149 TCAAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGG < 2:313880/149‑1 TCAAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTAGCCAGCACGGCTTGG > 7:243112/1‑149 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGC > 6:139767/1‑149 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGC > 8:130731/1‑149 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGC > 6:133559/1‑149 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGC > 2:122382/1‑149 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGG < 3:317984/148‑1 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGG < 3:245584/148‑1 AAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGG < 6:322516/148‑1 GATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTG < 8:153512/113‑1 GATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTG > 7:153512/1‑113 TTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGG > 8:275038/1‑85 TTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGG < 7:275038/85‑1 CCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGCGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAG > 5:164690/1‑149 AGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCAT < 2:127583/128‑1 AGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCAT > 1:127583/1‑128 TCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGCGACTGGAGCGGCTAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATC < 6:56964/118‑1 TCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGCGACTGGAGCGGCTAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATC > 5:56964/1‑118 TCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGCGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCT > 2:238347/1‑149 GGCGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCTTTGATCTGCACGTAGCGAACAAAAGTCAGCTGGCCGAA < 5:231712/147‑1 GGCGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCT > 7:304533/1‑109 GGCGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCT < 8:304533/109‑1 CGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCTTTGATCTGCACGTAGCGAACAAAAGTCAGCTGGCCGAACAAG > 7:270903/1‑149 GATCAAAGAACTTGCGACGGGCGTGGGCCATGCAGCCGATTTCAGTGATGCCTTGCTCAAAACCGGCTTTGTAGCCAGCGAAGTCATCGCAGACCAACTTACCGTTCCAGTCGCCCAGGAAGTTGCGCGCATGTTCGCCAGCACGGCTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5034984‑5034832‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcGACTGGAGCGGCAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGGTTTGAGCAAGGCATCACTGAAATCGGCTGTATGGCCCACGCCCGTCGCAAGTTCTTTGATCTGCACGTAGCGAACAAAAGTCAGCTGGCCGAACAAG > NC_002947/5037821‑5037968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |