| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5034832 = | 0 (0.000) | 6 (0.120) | 3/250 | NT | 100% | coding (872/1536 nt) | PP_4439 | transposase |
| ? | NC_002947 | 5037821 = | NA (NA) | coding (913/1536 nt) | PP_4443 | transposase | |||||
GAAGCGGTGCTGAACCAGGGCGTGATTCACGCTGATGAAACCCCGGTGCAAATGCTTGCGCCGGGCGAGAAGAAAACCCACCGGGCCTATGTCTGGGCCTACAGCACGACGCCGTTTTCGGCGCTCAACGCGGTGGTTTATGACTTCAGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGTCGCAAGTTCTTT > NC_002947/5034684‑5034980 | cttgttcggccagctgacttttgttcgctacgtgcagatcaaagaacttgcgacgggcgtgggccatacagccgatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaacttgccgctccagtcg > 7:270903‑M1/149‑149 (MQ=255) ttcggccagctgacttttgttcgctacgtgcagatcaaagaacttgcgacgggcgtgggccatacagccgatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaacttgccgctccagtcGcc < 5:231712‑M1/3‑1 (MQ=255) agaacttgcgacgggcgtgggccatacagccgatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaacttgccgctccagtcGcc > 7:304533‑M1/107‑109 (MQ=255) agaacttgcgacgggcgtgggccatacagccgatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaacttgccgctccagtcGcc < 8:304533‑M1/3‑1 (MQ=255) agaacttgcgacgggcgtgggccatacagccgatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaacttgccgctccagtcGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGa > 2:238347‑M1/107‑149 (MQ=255) cttgcgacgggcgtgggccatacagccgatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaacttgccgctccagtcGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTgg > 5:164690‑M1/103‑149 (MQ=255) atgcagccgatttcagtgatgccttgctcaaaaccggctttgtagccagcgaagtcatcgcagaccaacttaccgttccagtcGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACt > 1:127583‑M1/84‑128 (MQ=255) atgcagccgatttcagtgatgccttgctcaaaaccggctttgtagccagcgaagtcatcgcagaccaacttaccgttccagtcGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACt < 2:127583‑M1/45‑1 (MQ=255) gatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaactagccgctccagtcGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGa > 5:56964‑M1/76‑118 (MQ=255) gatttcagtgatgccttgctcaaacccggctttgtagccagcgaagtcatcgcagaccaactagccgctccagtcGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGa < 6:56964‑M1/43‑1 (MQ=255) GCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGTCGCAAGTTCttt > 2:122382‑M1/1‑149 (MQ=255) GCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGTCGCAAGTTCttt > 6:133559‑M1/1‑149 (MQ=255) GCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGTCGCAAGTTCttt > 6:139767‑M1/1‑149 (MQ=255) GCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGTCGCAAGTTCttt > 8:130731‑M1/1‑149 (MQ=255) | GAAGCGGTGCTGAACCAGGGCGTGATTCACGCTGATGAAACCCCGGTGCAAATGCTTGCGCCGGGCGAGAAGAAAACCCACCGGGCCTATGTCTGGGCCTACAGCACGACGCCGTTTTCGGCGCTCAACGCGGTGGTTTATGACTTCAGCCCAAGCCGTGCTGGCGAACATGCGCGCAACTTCCTGGGCGACTGGAACGGTAAGTTGGTCTGCGATGACTTCGCTGGCTACAAAGCCGGTTTTGAGCAAGGCATCACTGAAATCGGCTGCATGGCCCACGCCCGTCGCAAGTTCTTT > NC_002947/5034684‑5034980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |