| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5115458 | 80 (1.480) | 4 (0.080) | 4/248 | NT | 5.1% | coding (328/861 nt) | PP_4500 | TrpH family protein |
| ? | NC_002947 | = 5115491 | 74 (1.440) | coding (295/861 nt) | PP_4500 | TrpH family protein | |||||
GCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5115305‑5115458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCC < NC_002947/5115491‑5115345 GCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGTGCCTTCGAGCGTGCCGGGCATGCCCTTG < 1:19640/149‑1GCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTG < 5:326848/149‑1 CACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGC < 3:65750/149‑1 TTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGC > 3:72309/1‑149 TTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGC > 5:198032/1‑149 CCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCTGGCTGCGTGCCG > 5:325816/1‑147 CACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAA < 6:325816/149‑1 GGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAG > 1:114825/1‑117 GGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAG < 2:114825/117‑1 GCTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCC > 7:185235/1‑149 GCCACTTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5115305‑5115458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcTGGCTGCGTGCCGAAGAAATCGACAGACGGCTGGCGGCCAAGGGCATGCCCGGCACGCTCGAAGGCGCGCGCGCCGTGCAGCACGAGTTGGGTGACAGCGGCAACGCCCCGGCGCGCCCGCATTTTGCCGAGTATCTGGTGCGGGCC < NC_002947/5115491‑5115345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |