New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 511545880 (1.480)4 (0.080) 4/248 NT 5.1% coding (328/861 nt) PP_4500 TrpH family protein
?NC_002947 = 5115491 74 (1.440)coding (295/861 nt) PP_4500 TrpH family protein

TTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGCTCCACCCC  >  NC_002947/5115310‑5115605
                                                                                                                                                     |                                                                                                                                                   
ttGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGC                                                                                                                                                     >  3:72309‑M1/1‑149 (MQ=255)
ttGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGC                                                                                                                                                     >  5:198032‑M1/1‑149 (MQ=255)
    gAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCATGAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAg                                                                                                                                                  >  1:263026/1‑149 (MQ=255)
    gAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGc                                                                                                                                                 >  5:340025/1‑149 (MQ=255)
     aaaCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGcc                                                                                                                                                >  4:313367/1‑149 (MQ=255)
     aaaCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGcc                                                                                                                                                >  1:87972/1‑149 (MQ=255)
       aCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGt                                                                                                                                              <  1:316907/149‑1 (MQ=255)
       aCGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGt                                                                                                                                              <  1:322004/149‑1 (MQ=255)
             caccacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTc                                                                                                                                             <  6:261146/144‑1 (MQ=255)
             caccacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTc                                                                                                                                             >  5:261146/1‑144 (MQ=255)
              accacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCg                                                                                                                                        <  6:198032/148‑1 (MQ=255)
              accacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGa                                                                                                                                       >  3:204804/1‑149 (MQ=255)
              accacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGa                                                                                                                                       <  6:318097/149‑1 (MQ=255)
              accacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGa                                                                                                                                       >  2:69307/1‑149 (MQ=255)
               ccacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCtggctgcgtgccg                                                                                                                                        >  5:325816‑M1/1‑134 (MQ=255)
               ccacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGAt                                                                                                                                      >  4:283329/1‑149 (MQ=255)
                cacGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGAtt                                                                                                                                     >  4:248679/1‑149 (MQ=255)
                    gTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATttctt                                                                                                                                 <  8:41386/149‑1 (MQ=255)
                      ccTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCg                                                                                                                               >  3:232087/1‑149 (MQ=255)
                      ccTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGACATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCg                                                                                                                               >  1:308013/1‑149 (MQ=255)
                      ccTTGACGCGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCg                                                                                                                               >  1:272885/1‑149 (MQ=255)
                       cTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCgg                                                                                                                              <  7:1557/149‑1 (MQ=255)
                       cTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCgg                                                                                                                              <  6:130752/149‑1 (MQ=255)
                       cTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCg                                                                                                                               <  6:340025/148‑1 (MQ=255)
                         tGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCa                                                                                                                            >  8:174453/1‑149 (MQ=255)
                           aCGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCAc                                                                                                                           <  4:232087/148‑1 (MQ=255)
                           aCGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCAc                                                                                                                           <  8:177683/148‑1 (MQ=255)
                                cccggcccgCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACg                                                                                                                          >  1:164955/1‑144 (MQ=255)
                                cccggcccgCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACg                                                                                                                          <  2:164955/144‑1 (MQ=255)
                                cccggcccgCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGcagc                                                                                                                      >  8:115934/1‑148 (MQ=255)
                                   ggCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAgc                                                                                                                  >  7:185235‑M2/1‑147 (MQ=255)
                                         cACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCtggctgcgtgccgaagaaatcgacagacggctggcggccaa                                                                                                            <  6:325816‑M1/149‑42 (MQ=255)
                                           ccAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCgtgg                                                                                                          >  6:205796/1‑149 (MQ=255)
                                                tACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAg                                                                                                     >  3:304423/1‑149 (MQ=255)
                                                   tCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGGCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAgcgc                                                                                                  >  7:52731/1‑149 (MQ=255)
                                                    cGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCt                                                                                                 >  4:166474/1‑149 (MQ=255)
                                                     ggCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGGCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCtt                                                                                                >  3:316030/1‑149 (MQ=255)
                                                     ggCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATttcttc                                                                                                                                <  2:294905/117‑1 (MQ=255)
                                                     ggCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCtt                                                                                                <  2:87972/149‑1 (MQ=255)
                                                     ggCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCtt                                                                                                <  4:72309/149‑1 (MQ=255)
                                                     ggCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCtt                                                                                                >  4:305389/1‑149 (MQ=255)
                                                       cAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTg                                                                                               >  8:74057/1‑148 (MQ=255)
                                                       cAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGa                                                                                              <  7:145796/149‑1 (MQ=255)
                                                                    gcgcCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCcagc                                                                                  <  7:174453/149‑1 (MQ=255)
                                                                      gcCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCcagcag                                                                                >  8:169532/1‑149 (MQ=255)
                                                                      gcCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCcagcag                                                                                >  4:22284/1‑149 (MQ=255)
                                                                         ggggCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTgg                                                                             <  2:263026/149‑1 (MQ=255)
                                                                           ggCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCtggctgcgtgccgaagaaatcgacagacggctggcggccaag                                                                                                           <  2:114825‑M1/117‑43 (MQ=255)
                                                                           ggCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCtggctgcgtgccgaagaaatcgacagacggctggcggccaag                                                                                                           >  1:114825‑M1/1‑75 (MQ=255)
                                                                             cGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGt                                                                         <  2:272885/149‑1 (MQ=255)
                                                                             cGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGACATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGt                                                                         <  2:308013/149‑1 (MQ=255)
                                                                               ttGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGc                                                                       <  3:305389/149‑1 (MQ=255)
                                                                               ttGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGc                                                                       <  3:90406/149‑1 (MQ=255)
                                                                                        tCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTgg                                                              <  7:169532/149‑1 (MQ=255)
                                                                                          aCCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGc                                                                                                       >  1:134708/1‑106 (MQ=255)
                                                                                          aCCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGc                                                                                                       <  2:134708/106‑1 (MQ=255)
                                                                                          aCCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTggg                                                             >  2:323373/1‑148 (MQ=255)
                                                                                          aCCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTggg                                                             >  5:312265/1‑148 (MQ=255)
                                                                                          aCCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTggg                                                             <  3:283329/148‑1 (MQ=255)
                                                                                           cccAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCCGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGAGTCGAGTggg                                                             >  4:96348/1‑147 (MQ=255)
                                                                                            ccAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAg                                                          >  1:316806/1‑149 (MQ=255)
                                                                                               aCTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCa                                                       >  3:221110/1‑149 (MQ=255)
                                                                                                 tCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCAt                                                      >  7:193316/1‑148 (MQ=255)
                                                                                                   gTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATa                                                     <  3:313367/147‑1 (MQ=255)
                                                                                                      ctgcACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAAccc                                                 <  4:149121/148‑1 (MQ=255)
                                                                                                      ctgcACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAAccc                                                 <  4:304423/148‑1 (MQ=255)
                                                                                                      ctgcACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAAcc                                                  >  6:62641/1‑147 (MQ=255)
                                                                                                      ctgcACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCa                                                <  3:22284/149‑1 (MQ=255)
                                                                                                        gcACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAg                                               >  3:6492/1‑148 (MQ=255)
                                                                                                         cACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTc                                                        >  4:220287/1‑138 (MQ=255)
                                                                                                         cACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTc                                                        <  3:220287/138‑1 (MQ=255)
                                                                                                            ggCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACat                                          <  5:62641/149‑1 (MQ=255)
                                                                                                              cgcgcgcgcCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACatgg                                        <  7:74057/149‑1 (MQ=255)
                                                                                                              cgcgcgcgcCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACatgg                                        <  1:69307/149‑1 (MQ=255)
                                                                                                                      ccTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTcgc                                <  4:6492/149‑1 (MQ=255)
                                                                                                                        ttCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAAcc                                                  >  3:229727/1‑129 (MQ=255)
                                                                                                                        ttCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAAcc                                                  <  4:229727/129‑1 (MQ=255)
                                                                                                                         tCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGcgcc                             >  4:289114/1‑149 (MQ=255)
                                                                                                                             gCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGccc                         >  7:187479/1‑149 (MQ=255)
                                                                                                                                tGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCAc                      <  3:248679/149‑1 (MQ=255)
                                                                                                                                  ccGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGt                    <  2:316806/149‑1 (MQ=255)
                                                                                                                                      gCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAg                <  5:205796/149‑1 (MQ=255)
                                                                                                                                        aTGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGa              <  8:187479/149‑1 (MQ=255)
                                                                                                                                           cccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCTTAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAg           >  5:298365/1‑149 (MQ=255)
                                                                                                                                           cccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAg           <  4:204804/149‑1 (MQ=255)
                                                                                                                                            ccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTc                                                        >  5:312724/1‑103 (MQ=255)
                                                                                                                                            ccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTc                                                        <  6:312724/103‑1 (MQ=255)
                                                                                                                                            ccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGc          <  3:289114/149‑1 (MQ=255)
                                                                                                                                            ccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGc          >  7:173060/1‑149 (MQ=255)
                                                                                                                                            ccTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGc          >  2:74507/1‑149 (MQ=255)
                                                                                                                                             cTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAgcggccaagggcatgcccggcacgctcgaaggcgcgcgcgccgtgcagcacgagttgggtgacagcggcaacgcc                                         >  1:114825‑M2/1‑42 (MQ=255)
                                                                                                                                             cTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAgcggccaagggcatgcccggcacgctcgaaggcgcgcgcgccgtgcagcacgagttgggtgacagcggcaacgcc                                         <  2:114825‑M2/117‑76 (MQ=255)
                                                                                                                                              ttGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAgcggccaagggcatgcccggcacgctcgaaggcgcgcgcgccgtgcagcacgagttgggtgacagcggcaacgccccggcgcgcccgcattttgccgagtatctggtg        <  6:325816‑M2/149‑109 (MQ=255)
                                                                                                                                                ggCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGCTcc       <  1:323373/148‑1 (MQ=255)
                                                                                                                                                  ccgccAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGCTCCAcc    >  3:212872/1‑149 (MQ=255)
                                                                                                                                                   cgccAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGCTCCAccc   <  4:221110/149‑1 (MQ=255)
                                                                                                                                                    gctggctgcgtgccgaagaaatcgacagacggctggcggccaagggcatgcccggcacgctcgaaggcgcgcgcgccgtgcagcacgagttgggtgacagcggcaacgccccggcgcgcccgcattttgccgagtatctggtgcgggcc  >  7:185235‑M1/1‑2 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
TTGCGAAACGCTTCACCACGGTCCTTGACGTGCCCGGCCCGCACCAGATACTCGGCAAAATGCGGGCGCGCCGGGGCGTTGCCGCTGTCACCCAACTCGTGCTGCACGGCGCGCGCGCCTTCGAGCGTGCCGGGCATGCCCTTGGCCGCCAGCCGTCTGTCGATTTCTTCGGCACGCAGCCAGCGGCCGTGGTGCAGCGCTTGAATCGCCGCCAGCAGTGGCGGTGCGTCGAGTGGGAAGTCATAACCCAGCACATGGATGGTCGCGCCGCCCCACGTGCAGGACAGCTCCACCCC  >  NC_002947/5115310‑5115605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.