| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5161610 = | 54 (1.000) | 3 (0.060) | 3/248 | NT | 5.4% | coding (378/1245 nt) | PP_4544 | hypothetical protein |
| ? | NC_002947 | 5161665 = | 54 (1.050) | coding (433/1245 nt) | PP_4544 | hypothetical protein | |||||
ATCAGGTGCAGGTTAGGCACTGCAGTCGGGTGCCAGTCGAGGTAGGCCAGGTCGACCCACAGCGACTTCTTGTCGAAGTAGTTGTCGAAGCTCTGGTTGGTCGAACGTCGGTCAGCGCTGCTGCCAGTGGCGATACGGACCCCAGCGTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5161762‑5161610‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaccAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGATTGGCGGCAAGATGCAACAGCCTTGGGTGAGCATGGGCGACATCATCTGG > NC_002947/5161665‑5161811 ATCAGGTGCAGGTTAGGCACTGCAGTCGGGTGCCAGTCGAGGTAGGCCAGGTCGACCCACAGCGACTTCTTGTCGAAGTAGTTGTCGAAGCTCTGGTTGGTCGAACGTCGGTCAGCGCTGCTGCCAGTGGCGATACGGACCCCAGCGTC > 8:21715/1‑149 GAACGTCGGTCAGCGCTGCTGCCAGTGGCGATACGGACCCCAGCGTCGACCAACCAGAGCTTCGCCAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGAT > 6:4619/1‑149 AACGTCGGTCAGCGCTGCTGCCAGTGGCGATACGGACCCCAGCGTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACC < 7:246716/108‑1 AACGTCGGTCAGCGCTGCTGCCAGTGGCGATACGGACCCCAGCGTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACC > 8:246716/1‑108 gaTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGATTGGCGGCAAGATGCAACAGCCTTGGGTGAGCATGGGCGACATC < 2:103467/147‑1 ACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGATTGGCGGCAAGATGCAACAGCCTTGGGTGAGCATGGGCGACATCATCTG < 5:93437/149‑1 CCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGATTGGCGGCAAGATGCAACAGCCTTGGGTGAGCATGGGCGACATCATCTGG < 1:165682/149‑1 CAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGATTGGCGGCAAGATGCAACAGCCTTGGGTGAGCATGGGCGACATCATCTGG > 6:343762/1‑148 ATCAGGTGCAGGTTAGGCACTGCAGTCGGGTGCCAGTCGAGGTAGGCCAGGTCGACCCACAGCGACTTCTTGTCGAAGTAGTTGTCGAAGCTCTGGTTGGTCGAACGTCGGTCAGCGCTGCTGCCAGTGGCGATACGGACCCCAGCGTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5161762‑5161610‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaccAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGCACCTGATTGGCGGCAAGATGCAACAGCCTTGGGTGAGCATGGGCGACATCATCTGG > NC_002947/5161665‑5161811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |