New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5161610 =	54 (1.000)	3 (0.060)	3/248	NT	5.4%	coding (378/1245 nt)	PP_4544	hypothetical protein
	?	NC_002947	5161665 =	54 (1.050)					coding (433/1245 nt)	PP_4544	hypothetical protein

GGCATGGGCCGCCAAGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGC  >  NC_002947/5161463‑5161755                                                                                                                                                    |                                                                                                                                                  ccagatgatgtcgcccatgctcacccaaggctgttgcatcttgccgccaatcaggtgcaggttaggcactgcagtcgggtgccagtcgaggtaggccaggtcgacccacagcgacttcttgtcgaagtagttgtcgaagctctggttgg                                                                                                                                                  <  1:165682‑M1/2‑1 (MQ=255) ccagatgatgtcgcccatgctcacccaaggctgttgcatcttgccgccaatcaggtgcaggttaggcactgcagtcgggtgccagtcgaggtaggccaggtcgacccacagcgacttcttgtcgaagtagttgtcgaagctctggttg                                                                                                                                                   >  6:343762‑M1/148‑148 (MQ=255)  gCATGGGCCGCCAAGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGt                                                                                                                                                 <  1:332783/149‑1 (MQ=255)  cagatgatgtcgcccatgctcacccaaggctgttgcatcttgccgccaatcaggtgcaggttaggcactgcagtcgggtgccagtcgaggtaggccaggtcgacccacagcgacttcttgtcgaagtagttgtcgaagctctggttggt                                                                                                                                                 <  5:93437‑M1/3‑1 (MQ=255)       gatgtcgcccatgctcacccaaggctgttgcatcttgccgccaatcaggtgcaggttaggcactgcagtcgggtgccagtcgaggtaggccaggtcgacccacagcgacttcttgtcgaagtagttgtcgaagctctggttGGTcgatc                                                                                                                                            <  2:103467‑M1/8‑3 (MQ=255)            ccAAGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTggg                                                                                                                                       >  5:214024/1‑149 (MQ=255)            ccAAGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTggg                                                                                                                                       >  7:235323/1‑149 (MQ=255)            ccAAGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTggg                                                                                                                                       >  3:242773/1‑149 (MQ=255)               agtcccAGATCAAGGGTGACGTCCGCCTGCGTTACGAAGACGTCATCGTCGACGATCCGAACAGCAGCATCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTc                                                                                                                                    <  6:74593/146‑1 (MQ=255)               aGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTc                                                                                                                                    <  8:270486/149‑1 (MQ=255)                   ccAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGTAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTa                                                                                                                                >  6:335504/1‑149 (MQ=255)                      gATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCg                                                                                                                             >  6:223209/1‑149 (MQ=255)                       aTCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGc                                                                                                                            <  4:242773/149‑1 (MQ=255)                             ggTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTgg                                                                                                                      <  3:178175/149‑1 (MQ=255)                               tGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGgca                                                                                                                    <  2:340060/149‑1 (MQ=255)                                    tGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCagcagc                                                                                                               <  6:14477/149‑1 (MQ=255)                                     gcgcCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAgcg                                                                                                              <  2:139470/149‑1 (MQ=255)                                       gcCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCt                                                                                                            <  4:112521/149‑1 (MQ=255)                                       gcCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCt                                                                                                            <  5:223209/149‑1 (MQ=255)                                            cGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGAcc                                                                                                        <  1:70612/148‑1 (MQ=255)                                            cGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGAc                                                                                                         <  5:322707/147‑1 (MQ=255)                                              ttACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGAc                                                                                                     >  6:124855/1‑149 (MQ=255)                                                aCGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGt                                                                                                   >  8:138975/1‑149 (MQ=255)                                                  gAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTg                                                                                                                                         >  2:87578/1‑109 (MQ=255)                                                  gAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTg                                                                                                                                         <  1:87578/109‑1 (MQ=255)                                                  atcaggtgcaggttaggcactgcagtcgggtgccagtcgaggtaggccaggtcgacccacagcgacttcttgtcgaagtagttggcgaagctctggttGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTc                                                                                                 >  6:4619‑M1/99‑149 (MQ=255)                                                   aaGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCg                                                                                                <  2:328578/149‑1 (MQ=255)                                                     gACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGAGCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGac                                                                                              <  8:67178/149‑1 (MQ=255)                                                         tCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGaccaac                                                                                          <  3:326680/149‑1 (MQ=255)                                                             cGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGaccaacca                                                                                        >  7:125992/1‑147 (MQ=255)                                                                   cgaTCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCg                                                                                <  5:124855/149‑1 (MQ=255)                                                                    gaTCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGa                                                                               >  1:141908/1‑149 (MQ=255)                                                                      tCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGAc                                                                              >  8:233016/1‑148 (MQ=255)                                                                           aCAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAactac                                                                        <  8:235323/149‑1 (MQ=255)                                                                           aCAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAactac                                                                        <  6:214024/149‑1 (MQ=255)                                                                              gcagcagcGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTc                                                                     <  4:293527/149‑1 (MQ=255)                                                                                  cagcGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCtt                                                                                  >  2:64471/1‑132 (MQ=255)                                                                                  cagcGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCtt                                                                                  <  1:64471/132‑1 (MQ=255)                                                                                    gcGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACaag                                                               <  7:233016/149‑1 (MQ=255)                                                                                          ggtaggccaggtcgacccacagcgacttcttgtcgaagtagttgtcgaagctctggttGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGtt                                                                                                  >  8:246716‑M1/59‑108 (MQ=255)                                                                                          ggtaggccaggtcgacccacagcgacttcttgtcgaagtagttgtcgaagctctggttGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGtt                                                                                                  <  7:246716‑M1/50‑1 (MQ=255)                                                                                              ggACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCtgt                                                     >  7:21715/1‑149 (MQ=255)                                                                                                    ccAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTc                                                >  3:217711/1‑148 (MQ=255)                                                                                                           gTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGc                                        <  2:141908/149‑1 (MQ=255)                                                                                                            tACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCg                                                                                <  8:247485/108‑1 (MQ=255)                                                                                                            tACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCg                                                                                >  7:247485/1‑108 (MQ=255)                                                                                                                 gCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCt                                  <  6:19662/149‑1 (MQ=255)                                                                                                                   ccGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTc                                 >  3:238650/1‑148 (MQ=255)                                                                                                                   ccGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTc                                 >  7:172694/1‑148 (MQ=255)                                                                                                                         cGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGc                          <  7:138975/149‑1 (MQ=255)                                                                                                                          ggCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGt                                                           <  2:212747/115‑1 (MQ=255)                                                                                                                          ggCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGt                                                           >  1:212747/1‑115 (MQ=255)                                                                                                                               cTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGa                    >  7:62238/1‑149 (MQ=255)                                                                                                                                 aCAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCt                                      <  8:263006/129‑1 (MQ=255)                                                                                                                                 aCAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCt                                      >  7:263006/1‑129 (MQ=255)                                                                                                                                  cAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTg                 <  8:62238/149‑1 (MQ=255)                                                                                                                                       agaTCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTg            >  7:210202/1‑149 (MQ=255)                                                                                                                                        gaTCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGc           <  5:335504/149‑1 (MQ=255)                                                                                                                                           cAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAact                                                                          >  3:316166/1‑83 (MQ=255)                                                                                                                                           cAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAact                                                                          <  4:316166/83‑1 (MQ=255)                                                                                                                                             aCCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAAc      >  2:244102/1‑149 (MQ=255)                                                                                                                                              cccGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAAcc     <  4:238650/149‑1 (MQ=255)                                                                                                                                                 gCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGc  <  4:217711/149‑1 (MQ=255)                                                                                                                                                  cAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCAcc                       >  4:310895/1‑127 (MQ=255)                                                                                                                                                  cAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCAcc                       >  4:315897/1‑127 (MQ=255)                                                                                                                                                  cAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCAcc                       <  3:315897/127‑1 (MQ=255)                                                                                                                                                  cAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCAcc                       <  3:310895/127‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GGCATGGGCCGCCAAGACCCAGATCAAGGGTGACGTGCGCCTGCGTTACGAAGACGTCAACGTCGACGATCCGAACAGCAGCAGCGGCAACCAGGACCGCCAGCGAGTACGTGCCCGTGTCGGCTTCTACAGCGAGATCAACCCGCAGGTCGACGCTGGGGTCCGTATCGCCACTGGCAGCAGCGCTGACCGACGTTCGACCAACCAGAGCTTCGACAACTACTTCGACAAGAAGTCGCTGTGGGTCGACCTGGCCTACCTCGACTGGCACCCGACTGCAGTGCCTAACCTGC  >  NC_002947/5161463‑5161755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.