New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5481748 =	69 (1.280)	5 (0.100)	5/252	NT	7.0%	coding (1237/1356 nt)	PP_4819	hypothetical protein
	?	NC_002947	5481789 =	67 (1.280)					coding (1278/1356 nt)	PP_4819	hypothetical protein

TGTCTTGTCGCTCGCTGCTGGCCGCTTGTCGCCTACTCTGGCGAACGGAAGCTCAGGCTGTAATTCACGGCCTTCGGGCCAGGGTCGAGGATGTCCAGGGCAATGTGGATTGGCGTCTGGCTGGGCATTTCACCGCGCCCTGCCAGTTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5481899‑5481748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGCC  >  NC_002947/5481789‑5481936                                                                                                                                                                                                                                                                                                              TGTCTTGTCGCTCGCTGCTGGCCGCTTGTCGCCTACTCTGGCGAACGGAAGCTCAGGCTGTAATTCACGGCCTTCGGGCCAGGGTCGAGGATGTCCAGGGCAATGTGGATTGGCGTCTGGCTGGGTATTTCACCGCGCCCTGCCAGTTC                                                                                                                                                         >  1:178757/1‑149   TCTTGTCGCTCGCTGCTGGCCGCTTGTCGCCTACTCTGGCGAACGGAAGCTCAGGCTGTAATTCACGGCCTGCGGGCCAGGGTCGAGGATGTGAAGGGCAATGTGGATGGGGGTCTGGCTTGGGATTTACCCTCGCACTGCCAGTTCGa                                                                                                                                                       >  8:308319/1‑148                                                                                                           GGATTGGCGTCTGGCTGGGCATTTCACCGCGCCCTGCCAGTTCGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAG                                                        >  1:228519/1‑140                                                                                                           GGATTGGCCTCTGGCTGGGCATTTCACCGCGCCCTGCCAGTTCGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAG                                                        <  2:228519/140‑1                                                                                                                 GCGTCTGGCTGGGCATTTCACCGCGCCCTGCCAGTTCGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGA                                         >  4:128415/1‑149                                                                                                                      TGGCTGGGCATTTCACCGCGCCCTGCCAG‑ACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAG                                     >  8:235935/1‑147                                                                                                                        GCTGGGCATTTCACCGCGCCCTGCCAG‑ACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAG                                  <  7:235935/148‑1                                                                                                                                                     CGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTC     <  3:170522/149‑1                                                                                                                                                      GCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGACG    >  8:39527/1‑149                                                                                                                                                      GCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTT              <  3:296605/139‑1                                                                                                                                                      GCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTT              >  4:296605/1‑139                                                                                                                                                      GCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAA                                      >  8:135766/1‑115                                                                                                                                                        CAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGCC  >  3:304294/1‑149                                                                                                                                                        CAATCCACATTGCCATGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGACTGAGCTTCCGTTCGACAGAGTAGTCGACAAGCGGCCAGCAGCGAGCCACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGCC  >  5:274870/1‑149                                                                                                                                                                                                                                                                                                              TGTCTTGTCGCTCGCTGCTGGCCGCTTGTCGCCTACTCTGGCGAACGGAAGCTCAGGCTGTAATTCACGGCCTTCGGGCCAGGGTCGAGGATGTCCAGGGCAATGTGGATTGGCGTCTGGCTGGGCATTTCACCGCGCCCTGCCAGTTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5481899‑5481748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCCTGAGCTTCCGTTCGCCAGAGTAGGCGACAAGCGGCCAGCAGCGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGCC  >  NC_002947/5481789‑5481936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.