New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5481748 =	69 (1.280)	5 (0.100)	5/252	NT	7.0%	coding (1237/1356 nt)	PP_4819	hypothetical protein
	?	NC_002947	5481789 =	67 (1.280)					coding (1278/1356 nt)	PP_4819	hypothetical protein

CGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGCC  >  NC_002947/5481643‑5481936                                                                                                                                                   |                                                                                                                                                         cgcgcgCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAAt                                                                                                                                                        >  8:74376/1‑149 (MQ=255)  gcgcgcCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATc                                                                                                                                                       <  5:146397/149‑1 (MQ=255)  gcgcgcCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATc                                                                                                                                                       >  7:177337/1‑149 (MQ=255)   cgcgcCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATcc                                                                                                                                                      <  7:74376/149‑1 (MQ=255)      gcCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCcaca                                                                                                                                                   >  6:149534/1‑149 (MQ=255)            ctggccgcttgtcgcctactctggcgaacggaagctcaggctgtaattcacggccttcgggccagggtcgaggatgtccagggcaatgtggattGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGAGGCCAATcc                                                                                                                                                      <  2:228519‑M1/46‑1 (MQ=255)            ctggccgcttgtcgcctactctggcgaacggaagctcaggctgtaattcacggccttcgggccagggtcgaggatgtccagggcaatgtggattGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATcc                                                                                                                                                      >  1:228519‑M1/95‑140 (MQ=255)             gCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCt                                                                                                                                            >  3:157270/1‑149 (MQ=255)             gCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCt                                                                                                                                            >  4:33399/1‑149 (MQ=255)                cAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGa                                                                                                                                         <  4:157270/149‑1 (MQ=255)                 aGCCATTCCCGTTGCTGGAGCTGCGCGTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGAc                                                                                                                                        <  8:179087/149‑1 (MQ=255)                     aTTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTgg                                                                                                                                          >  8:232210/1‑143 (MQ=255)                     aTTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTgg                                                                                                                                          <  7:232210/143‑1 (MQ=255)                        cccGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTc                                                                                                                                  <  4:27364/148‑1 (MQ=255)                           gTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGAcc                                                                                                                              >  7:226811/1‑149 (MQ=255)                           gTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGAcc                                                                                                                              >  2:333498/1‑149 (MQ=255)                               cTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGTCAATCCACATTGCCCTGGACATCCTCGACCCTgg                                                                                                                          <  1:45826/149‑1 (MQ=255)                               cTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTg                                                                                                                           <  8:226811/148‑1 (MQ=255)                                     cTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATcc                                                                                                                                                      <  8:297833/115‑1 (MQ=255)                                     cTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATcc                                                                                                                                                      >  7:297833/1‑115 (MQ=255)                                     cTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGaa                                                                                                                    <  5:72562/149‑1 (MQ=255)                                         gcTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGcc                                                                                                                <  3:33399/149‑1 (MQ=255)                                              gCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCTCGGTGAAATGCCCAGACAGACGCGAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGaa                                                                                                           <  7:105491/149‑1 (MQ=255)                                               ccGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAAt                                                                                                          >  2:94423/1‑149 (MQ=255)                                               ccGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAAt                                                                                                          >  4:66935/1‑149 (MQ=255)                                                cGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAAtt                                                                                                         <  3:66935/149‑1 (MQ=255)                                                   ccTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACa                                                                                                      <  6:56642/149‑1 (MQ=255)                                                    cTCAATGGCCAACTGATCGCGAGCCGTCTCTTCAAGCCCAGAGAGTACCTGTCTGTCGAACTGGCAGGGCGCTGTGAAATGCCCAGCCAGACGCGAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAg                                                                                                     <  8:177337/149‑1 (MQ=255)                                                    cTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAg                                                                                                     >  5:330893/1‑149 (MQ=255)                                                       aaTGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGc                                                                                                    <  6:330893/147‑1 (MQ=255)                                                       aaTGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGc                                                                                                    <  3:311521/147‑1 (MQ=255)                                                           gCCAACTGATCTCCAGCCGTCGCTTCAAGACCAGCGAGTACCTGTCGTGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGc                                                                                             <  7:109614/149‑1 (MQ=255)                                                           gCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAg                                                                                              <  2:45842/148‑1 (MQ=255)                                                            ccAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCt                                                                                            >  4:232053/1‑149 (MQ=255)                                                               aCTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTcc                                                                                         <  4:83131/149‑1 (MQ=255)                                                                  gATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGtt                                                                                      >  3:251829/1‑149 (MQ=255)                                                                  gATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATACCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGtt                                                                                      >  2:178757/1‑149 (MQ=255)                                                                      gCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGc                                                                                  >  4:274670/1‑148 (MQ=255)                                                                      gCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGc                                                                                  <  4:251829/148‑1 (MQ=255)                                                                            cGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGa                                                                                                            >  4:318950/1‑118 (MQ=255)                                                                            cGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGa                                                                                                            <  3:318950/118‑1 (MQ=255)                                                                             gTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAg                                                                          >  4:299137/1‑149 (MQ=255)                                                                             gTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGAGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAg                                                                          <  5:149534/149‑1 (MQ=255)                                                                                gCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑Gc                                                                      >  4:246942/1‑148 (MQ=255)                                                                                    cAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACaa                                                                 >  8:38495/1‑149 (MQ=255)                                                                                     aaGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAg                                                                >  6:320124/1‑149 (MQ=255)                                                                                      aGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGc                                                               >  1:20493/1‑149 (MQ=255)                                                                                       gCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCg                                                              <  3:232053/149‑1 (MQ=255)                                                                                       gCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCg                                                              <  6:48209/149‑1 (MQ=255)                                                                                         ccAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGTCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGc                                                            >  2:41367/1‑149 (MQ=255)                                                                                                gTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCagcag‑c                                                    >  5:97534/1‑149 (MQ=255)                                                                                                  aCCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCagcag‑c                                                    >  7:194428/1‑147 (MQ=255)                                                                                                    cTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGTCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTTCCGCCAGAGTAG‑‑GCGACAAGCGGCCAGCag‑cgag                                                 <  1:41367/149‑1 (MQ=255)                                                                                                    cTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCag‑cgagc                                                >  6:31126/1‑149 (MQ=255)                                                                                                     ggattggcgtctggctgggcatttcaccgcgccctgccagttcgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCcag                                                         >  1:228519‑M2/47‑140 (MQ=255)                                                                                                     ggattggcctctggctgggcatttcaccgcgccctgccagttcgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCcag                                                         <  2:228519‑M2/94‑1 (MQ=255)                                                                                                       tCGGGCGAACTGGCAGGGCGCGGTGAAGTGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAg‑cgagcga                                              <  4:153457/148‑1 (MQ=255)                                                                                                       tCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGaa                                                                                                           >  5:204998/1‑92 (MQ=255)                                                                                                       tCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGaa                                                                                                           <  6:204998/92‑1 (MQ=255)                                                                                                         gggCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCgac                                             >  4:170522/1‑147 (MQ=255)                                                                                                           tCGAACTGGCAGTGCGAGGGTAAATCCCAAGCCAGACCCCCATCCACATTGCCCTTCACATCCTCGACCCTGGCCCGCAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCgacaaga                                         >  8:308319‑M1/2‑149 (MQ=255)                                                                                                           gcgtctggctgggcatttcaccgcgccctgccagttcgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCgacaaga                                         >  4:128415‑M2/41‑149 (MQ=255)                                                                                                             GAACTGGCAGGGCGCGGTGAAATACCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCgacaagaca                                       >  1:178757‑M1/1‑149 (MQ=255)                                                                                                               aCTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCgacaagac                                        >  4:44604/1‑146 (MQ=255)                                                                                                               aCTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGacaagacaag                                     <  3:44604/149‑1 (MQ=255)                                                                                                                 tggctgggcatttcaccgcgccctgccagacgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGacaagacaag                                     >  8:235935‑M2/35‑147 (MQ=255)                                                                                                                 tGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTTAATTACACCCTTCAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGAcaagacaaga                                    <  1:94423/149‑1 (MQ=255)                                                                                                                   gctgggcatttcaccgcgccctgccagacgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACaagaag                                  <  7:235935‑M2/116‑1 (MQ=255)                                                                                                                     aGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGccc                               <  7:38495/149‑1 (MQ=255)                                                                                                                       ggCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGcccc                              >  7:239304/1‑148 (MQ=255)                                                                                                                          gcgGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAAcc                          <  6:97534/149‑1 (MQ=255)                                                                                                                          gcgGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAAcc                          >  2:94523/1‑149 (MQ=255)                                                                                                                              tGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGa                      <  3:274670/149‑1 (MQ=255)                                                                                                                              tGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGa                      <  3:246942/149‑1 (MQ=255)                                                                                                                                aaaTGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGTCCCAACCGCGAcc                    >  2:124438/1‑149 (MQ=255)                                                                                                                                    gCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGCCCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCtt                >  2:275913/1‑149 (MQ=255)                                                                                                                                    gCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAGCCGAGCGACAAGACAAGAAGCCCCAAcc                          <  1:189881/140‑1 (MQ=255)                                                                                                                                    gCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAAcc                          >  2:189881/1‑139 (MQ=255)                                                                                                                                      ccagccagACGCCAATCCACATTTCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAGCCGCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCtt                <  1:94523/149‑1 (MQ=255)                                                                                                                                      ccagccagACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCtttt              >  7:315623/1‑149 (MQ=255)                                                                                                                                       cagccagACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCag‑cgag                                                 <  7:58645/113‑1 (MQ=255)                                                                                                                                       cagccagACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCag‑cgag                                                 >  8:58645/1‑113 (MQ=255)                                                                                                                                               cgccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTc     <  3:170522‑M2/145‑1 (MQ=255)                                                                                                                                                gccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCgacaagacaa                                      >  8:135766‑M2/4‑115 (MQ=255)                                                                                                                                                gccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCtttt              <  3:296605‑M2/136‑1 (MQ=255)                                                                                                                                                gccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCtttt              >  4:296605‑M2/4‑139 (MQ=255)                                                                                                                                                gccAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGACg    >  8:39527‑M2/4‑149 (MQ=255)                                                                                                                                                  cAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGcc  >  3:304294‑M2/2‑149 (MQ=255)                                                                                                                                                  cAATCCACATTGCCATGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGAC‑TGAGCTTCCGTT‑CGACAGAGTAG‑‑TCGACAAGCGGCCAGCAG‑CGAGCCACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGcc  >  5:274870‑M2/2‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                         CGCGCGCCGTTCGCCCAGCCATTCCCGTTGCTGGAGCTGCGCTTCGCCGACCTCAATGGCCAACTGATCGCCAGCCGTCGCTTCAAGCCCAGCGAGTACCTGTCGGGCGAACTGGCAGGGCGCGGTGAAATGCCCAGCCAGACGCCAATCCACATTGCCCTGGACATCCTCGACCCTGGCCCGAAGGCCGTGAATTACAGCC‑TGAGCTTCCGTT‑CGCCAGAGTAG‑‑GCGACAAGCGGCCAGCAG‑CGAGCGACAAGACAAGAAGCCCCAACCGCGACCGCTTTTCGTCCTGTCGCC  >  NC_002947/5481643‑5481936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.