| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5547926 = | 67 (1.240) | 4 (0.080) | 4/246 | NT | 5.7% | coding (1128/2574 nt) | rnr | exoribonuclease R |
| ? | NC_002947 | 5547986 = | 69 (1.350) | coding (1068/2574 nt) | rnr | exoribonuclease R | |||||
CCAGCAGCGCGGTAACTCGGTGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGTCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5548079‑5547926‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgacATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGTACACCGAGTTACCGCGCTGCTGGGCTTCGACATCCAGGGCAGAGCCCAGACGCACATAGCTGGAGACGTCAGCGAT > NC_002947/5547986‑5548132 CCAGCAGCGCGGTAACTCGGTGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGTCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGG > 8:151747/1‑149CCAGCAGCGCGGTAACTCGGTGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGGCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGTCCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGG < 5:229071/149‑1 CAGCAGCGCGGTAACTCGGTGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGTCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGT > 6:201071/1‑149 TGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGTCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGG < 1:54495/129‑1 TGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGTCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGG > 2:54495/1‑129 TGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGTCGACATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGTACACCGAGT > 5:180971/1‑141 TGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGTCGACATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGTACACCGAGT < 6:180971/141‑1 GTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGTCGACATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGT < 7:177621/131‑1 GTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGTCGACATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGT > 8:177621/1‑131 GACATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGTACACCGAGTTACCGCGCTGCTGGGCTTCGACATCCAGGGCAGAGCCCAGACGCACATAGCTGGAGACGTCAGCGA < 8:1062/149‑1 ACATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGTACACCGAGTTACCGCGCTGCTGGGCTTCGACATCCAGGGCAGAGCCCAGACGCACATAGCTGGAGACGTCAGCGAT > 2:183161/1‑149 CCAGCAGCGCGGTAACTCGGTGTACTTCCCCGAGCGCGTGGTGCCGATGCTCCCCGAAGAGCTGTCCAACGGCCTGTGCTCGCTGAACCCGCATGTCGACCGGTTGGCCATGGTCTGTGAAATGACCATGAACAAAGCCGGCCAGATGGTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5548079‑5547926‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgacATGCGGGTTCAGCGAGCACAGGCCGTTGGACAGCTCTTCGGGGAGCATCGGCACCACGCGCTCGGGGAAGTACACCGAGTTACCGCGCTGCTGGGCTTCGACATCCAGGGCAGAGCCCAGACGCACATAGCTGGAGACGTCAGCGAT > NC_002947/5547986‑5548132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |