| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5784052 | 54 (1.000) | 4 (0.080) | 4/246 | NT | 7.4% | coding (2527/3309 nt) | kefA | intermediate mechanosensitive channel protein |
| ? | NC_002947 | = 5784107 | 49 (0.960) | coding (2582/3309 nt) | kefA | intermediate mechanosensitive channel protein | |||||
GGTGTGGGCCGACCTGATCTCGGTGTTCGCCTACCTCAACAATTTCGTCCTCTACGAATACACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5783898‑5784052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCGGTGCCGCTGG < NC_002947/5784107‑5783960 GGTGTGGGCCGACCTGATCTCGGTGTTCGCCTACCTCAACAATTTCGTCCTCTACGAATACACCAGCGGCACCTGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCG < 3:266690/149‑1 CCTACCTCAACAATTTCGTCCTCTACGAATACACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGGCCAGGTTCAGGCGAGACAGCAC > 1:313491/1‑149 ACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCC < 3:12445/90‑1 ACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCC > 4:12445/1‑90 CGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAG < 2:313491/149‑1 TCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGG > 7:194305/1‑118 TCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGG < 8:194305/118‑1 CCCTGGGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCGGTGCC > 7:11124/1‑149 GGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCGGTGCCGCTGG < 1:14207/149‑1 GGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCGGTGCCGCTGG > 6:235544/1‑149 GGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCGGTGCCGCTG < 2:71747/148‑1 GGCCAGGATCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCCGTGCCGCTGG > 6:270535/1‑149 GGTGTGGGCCGACCTGATCTCGGTGTTCGCCTACCTCAACAATTTCGTCCTCTACGAATACACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5783898‑5784052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggGCCAGGTTCAGGCGAGACAGCACCAGTACTTCCAGCAAGCCTGGCAAGTTGCCGGCCAGGGCGAAGGTGATGCCGACGATCACCAGCGCGCCGAGCAGGTCGCCGAGGCTGATCGGTACCATGCTGGCGGCGGCGCCGGTGCCGCTGG < NC_002947/5784107‑5783960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |