New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 578405254 (1.000)4 (0.080) 4/246 NT 7.4% coding (2527/3309 nt) kefA intermediate mechanosensitive channel protein
?NC_002947 = 5784107 49 (0.960)coding (2582/3309 nt) kefA intermediate mechanosensitive channel protein

ACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAGGGCTGGGCTTCGG  >  NC_002947/5783959‑5784251
                                                                                                                                                    |                                                                                                                                                
acCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGc                                                                                                                                                  >  3:140345/1‑149 (MQ=255)
 ccAGCGGCACGGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGATCCTGGCc                                                                                                                                                 >  6:270535‑M2/1‑148 (MQ=255)
 ccAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCc                                                                                                                                                 <  1:14207‑M2/149‑2 (MQ=255)
 ccAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCc                                                                                                                                                 >  6:235544‑M2/1‑148 (MQ=255)
  cAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCc                                                                                                                                                 <  2:71747‑M2/148‑2 (MQ=255)
      ggCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCccaggg                                                                                                                                            >  7:11124‑M2/1‑143 (MQ=255)
        cACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCa                                                                                                                                          <  5:343508/149‑1 (MQ=255)
           cGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTg                                                                                                                                       <  4:269451/149‑1 (MQ=255)
            ggCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGc                                                                                                                                      >  5:10068/1‑149 (MQ=255)
               gccgccgccAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTa                                                                                                                                   <  2:14207/149‑1 (MQ=255)
                        aGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGccaccac                                                                                                                          >  5:111226/1‑149 (MQ=255)
                               tACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCtg                                                                                                                   <  6:10068/149‑1 (MQ=255)
                                          cTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTacac                                                                                                        >  2:144133/1‑149 (MQ=255)
                                          cTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTacac                                                                                                        >  6:86263/1‑149 (MQ=255)
                                           tCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGc                                                                                                                     <  7:275193/135‑1 (MQ=255)
                                           tCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGc                                                                                                                     >  8:275193/1‑135 (MQ=255)
                                              gCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCAtc                                                                                                    >  6:189854/1‑149 (MQ=255)
                                              gCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCGGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCAtc                                                                                                    <  2:208749/149‑1 (MQ=255)
                                                  ccTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCAtcgtcg                                                                                                >  5:180892/1‑149 (MQ=255)
                                                     gCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCg                                                                                                             <  5:255728/133‑1 (MQ=255)
                                                     gCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCg                                                                                                             >  6:255728/1‑133 (MQ=255)
                                                     gCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGtcggca                                                                                             >  3:136496/1‑149 (MQ=255)
                                                            gcgcTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTcggcatcggcat                                                                                      >  5:9641/1‑149 (MQ=255)
                                                               cTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGt                                                                                   <  5:86263/149‑1 (MQ=255)
                                                                             cATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGa                                                                     <  1:71747/149‑1 (MQ=255)
                                                                              aTCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCCCGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGAc                                                                    >  5:248729/1‑149 (MQ=255)
                                                                                  ccTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCccagggcgaaggtgatgccgacgatcaccagcgcgccgagcaggtcgccga                                                                                               <  8:194305‑M2/118‑52 (MQ=255)
                                                                                  ccTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCccagggcgaaggtgatgccgacgatcaccagcgcgccgagcaggtcgccga                                                                                               >  7:194305‑M2/1‑67 (MQ=255)
                                                                                  ccTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTg                                                                <  6:180892/149‑1 (MQ=255)
                                                                                  ccTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTg                                                                >  3:315836/1‑149 (MQ=255)
                                                                                   cTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCccagggcgaaggtgatgccgacgatcaccagcgcgccgagcaggtcgccgaggctgatcggtaccatgctggcggcggcgccg                                                               <  2:313491‑M2/149‑84 (MQ=255)
                                                                                      cGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTgggg                                                             <  1:144133/148‑1 (MQ=255)
                                                                                        cccTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTg                                                          <  4:136496/149‑1 (MQ=255)
                                                                                         ccTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTgg                                                               >  5:234437/1‑143 (MQ=255)
                                                                                         ccTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTgg                                                               <  6:234437/143‑1 (MQ=255)
                                                                                         ccTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGa                                                         <  7:33222/149‑1 (MQ=255)
                                                                                           tGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCCTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGc                                                       >  7:83329/1‑149 (MQ=255)
                                                                                               cGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTggg                                                   <  6:111226/149‑1 (MQ=255)
                                                                                                        gCCAGGCTTGCTGGTAGTTCTGGTGCTGTCTCGCCTGAACGTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGTGATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCt                                            <  6:248729/147‑1 (MQ=255)
                                                                                                        gCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGa                                                                     >  5:19829/1‑122 (MQ=255)
                                                                                                        gCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGa                                                                     <  6:19829/122‑1 (MQ=255)
                                                                                                        gCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTgggg                                                             <  1:317146/130‑1 (MQ=255)
                                                                                                        gCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTgggg                                                             >  2:317146/1‑130 (MQ=255)
                                                                                                         ccAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGc                                          >  8:25318/1‑148 (MQ=255)
                                                                                                              cTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGc                                    <  5:189854/149‑1 (MQ=255)
                                                                                                              cTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCCTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGc                                    <  8:83329/149‑1 (MQ=255)
                                                                                                                  cTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCtggt                                >  2:315315/1‑149 (MQ=255)
                                                                                                                    ggAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCtggtgg                              >  6:149656/1‑149 (MQ=255)
                                                                                                                     gAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTg                                                          <  3:297968/120‑1 (MQ=255)
                                                                                                                     gAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTg                                                          >  4:297968/1‑120 (MQ=255)
                                                                                                                     gAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCtggtg                               <  4:315836/147‑1 (MQ=255)
                                                                                                                      aaGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGcc                            <  7:25318/149‑1 (MQ=255)
                                                                                                                           cTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGCTGGCCGCGCt                       <  4:140345/149‑1 (MQ=255)
                                                                                                                              gTGCTGTCTCGCCTGAACCTGGCccagggcgaaggtgatgccgacgatcaccagcgcgccgagcaggtcgccgaggctgatcggtaccatgctggcggcggcgccggtgccgctggtgtattcgtagaggacgaaattgttgaggtagg                    >  1:313491‑M2/1‑23 (MQ=255)
                                                                                                                                      tcGCCTGAACCTGGCCCAGGGCAGTGACTACGCCACCACCACGCAGTTGTCGTACACCATCGTCGGCATCGGCATCGTCATCACAATGTCGACACTCGGCGTGAGCAGGTACAAGATCAAATCGCTGGTGGCCGCGCAGTCAgaacgg             >  8:313940/1‑143 (MQ=255)
                                                                                                                                        gCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAgggctg          >  3:33524/1‑149 (MQ=255)
                                                                                                                                        gCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAgggctg          >  3:37907/1‑149 (MQ=255)
                                                                                                                                         ccTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAgggctgg         <  6:9641/149‑1 (MQ=255)
                                                                                                                                         ccTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGGCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAgggctgg         >  5:263182/1‑149 (MQ=255)
                                                                                                                                          cTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGATCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAgggctggg        >  8:182499/1‑149 (MQ=255)
                                                                                                                                           tGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCAGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAgggctgggc       >  3:122884/1‑149 (MQ=255)
                                                                                                                                              cgcTGGCGCATGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTTAGCTGGGACTAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAGGGCTGGGCTTc    <  7:313940/147‑1 (MQ=255)
                                                                                                                                               ccTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAGGGCTGGGCTTCg   <  4:37907/149‑1 (MQ=255)
                                                                                                                                                 ttgCCAAGGGCAGTGCCTACCCCACCACCACGCTGATGTAGTAAACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGAACCTGGGGGTGACCTGGGACAAACAGCAATGGCTGGTGGACGCGCTGACAGTAGGGCTGGGCATCgg  >  2:116412/3‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
ACCAGCGGCACCGGCGCCGCCGCCAGCATGGTACCGATCAGCCTCGGCGACCTGCTCGGCGCGCTGGTGATCGTCGGCATCACCTTCGCCCTGGCCGGCAACTTGCCAGGCTTGCTGGAAGTACTGGTGCTGTCTCGCCTGAACCTGGCCCAGGGCAGTGCCTACGCCACCACCACGCTGTTGTCGTACACCATCGTCGGCATCGGCATCGTCAGCACCCTGTCGACCCTGGGGGTGAGCTGGGACAAGCTGCAATGGCTGGTGGCCGCGCTGTCAGTAGGGCTGGGCTTCGG  >  NC_002947/5783959‑5784251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.