New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5883043	67 (1.240)	5 (0.100)	5/242	NT	7.7%	coding (151/477 nt)	PP_5156	hypothetical protein
	?	NC_002947	= 5883077	58 (1.150)					coding (117/477 nt)	PP_5156	hypothetical protein

CGGCCTCTGGCATCAGGCTGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5882890‑5883043 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaggtcttCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCACCGTCAAGTTCGGTATCGAGGGTATGGGCCTCAAACCTGCGGGTGACCAAACCCCGCACACCGGGCACCACCAT  <  NC_002947/5883077‑5882960                                                                                                                                                                                                                                                                                  CGGCCTCTGGCATCAGGCTGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAG                                                                                                                             <  7:44512/149‑1   GCCTCTGGCATCAGGCTGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGAGGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGG                                                                                                                            >  4:323573/1‑148    CCTCTGGCATCAGGCTGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTC                                                                                                                          >  7:23029/1‑149    CCTCTGGCATCAGGCTGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTC                                                                                                                          >  7:28077/1‑149                   TGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTCATCGTTTCCCCC                                                                                                           >  3:141126/1‑149                                      AGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTCATCGTTTCACCCGCCGATGGTGCCACGGTC                                                                                         >  6:118350/1‑148                                                    TGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCA                                                                            <  8:36129/147‑1                                                     GTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCACC                                                                          <  5:118350/148‑1                                                         ACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCACCGTCAA                                                                     <  4:141126/149‑1                                                                                                                                                      GTCTTCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCACCGTCAAGTTCGGTATCGAGGGTATGGGCCTCAAACCTGCGGGTGACCAAACCCCGCACACCGGGCACCACCAT  <  5:158954/123‑1                                                                                                                                                      GTCTTCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCACCGTCAAGTTCGGTATCGAGGGTATGGGCCTCAAACCTGCGGGTGACCAAACCCCGCACACCGGGCACCACCAT  >  6:158954/1‑123                                                                                                                                                                                                                                                                                  CGGCCTCTGGCATCAGGCTGGTCGGCAGCGGCATGTCAGCCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5882890‑5883043 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaggtcttCATCGTTTCCCCCGCCGATGGTGCCACGGTCGACAAGACCTTCACCGTCAAGTTCGGTATCGAGGGTATGGGCCTCAAACCTGCGGGTGACCAAACCCCGCACACCGGGCACCACCAT  <  NC_002947/5883077‑5882960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.