New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 588304367 (1.240)5 (0.100) 5/242 NT 7.7% coding (151/477 nt) PP_5156 hypothetical protein
?NC_002947 = 5883077 58 (1.150)coding (117/477 nt) PP_5156 hypothetical protein

CCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCTGTGGTTCACTTATTGACCG  >  NC_002947/5882929‑5883223
                                                                                                                                                    |                                                                                                                                                  
ccACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATg                                                                                                                                                    <  1:134333/149‑1 (MQ=255)
             gTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGGCCTTCGcct                                                                                                                                       >  8:90815/1‑149 (MQ=255)
                 ggcaccaccaTCTGCTGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCtt                                                                                                                                   >  3:258888/5‑149 (MQ=255)
                 aCATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGACCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAACACCTTCGCCTCCtt                                                                                                                                   >  1:116167/1‑149 (MQ=255)
                  caaccaccaGCAGCTGGTGGTGCCCCGTGGGCGGGGCTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTg                                                                                                                                  <  8:296687/146‑1 (MQ=255)
                   aTCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTgg                                                                                                                                 >  5:90691/1‑149 (MQ=255)
                   aTCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTgg                                                                                                                                 >  2:161877/1‑149 (MQ=255)
                      caccaGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGAAGAAGACCTTCGCCTCCTTGggc                                                                                                                               <  3:208144/148‑1 (MQ=255)
                       accaGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGggcgg                                                                                                                             >  4:253027/1‑149 (MQ=255)
                            cagATGGTGGTGCCCGGTGTGCGGTGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCt                                                                                                                        <  2:202101/149‑1 (MQ=255)
                             agATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTg                                                                                                                       >  2:90074/1‑149 (MQ=255)
                              gagggtggtGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTgg                                                                                                                      <  3:323573/146‑1 (MQ=255)
                              gATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTgg                                                                                                                      >  7:76719/1‑149 (MQ=255)
                               ctggtggTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCt                                                                                                                        <  4:258888/145‑1 (MQ=255)
                               aTGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGaagac                                                                                                                                               <  5:158954‑M2/123‑6 (MQ=255)
                               aTGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGaagac                                                                                                                                               >  6:158954‑M2/1‑118 (MQ=255)
                               aTGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGc                                                                                                                     >  1:321235/1‑149 (MQ=255)
                                tggtggTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGct                                                                                                                    <  6:291700/149‑1 (MQ=255)
                                  gtggtgCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGctc                                                                                                                   <  2:321235/148‑1 (MQ=255)
                                             tgtgCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCt                                                                                                       <  4:4599/149‑1 (MQ=255)
                                                 cGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCg                                                                                                    <  2:4983/148‑1 (MQ=255)
                                                  ggggTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCgg                                                                                                   >  6:313363/1‑148 (MQ=255)
                                                   gggTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCa                                                                                                 >  6:240709/1‑149 (MQ=255)
                                                      tttGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTg                                                                                              <  7:158757/149‑1 (MQ=255)
                                                            cACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGaa                                                                                         >  2:35631/1‑148 (MQ=255)
                                                                cGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACATTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCg                                                                                    >  6:69368/1‑149 (MQ=255)
                                                                cGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCAACATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTTCGGCACTGGCGAACAcc                                                                                     >  3:17507/1‑148 (MQ=255)
                                                                    ggTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGc                                                                                <  1:161877/149‑1 (MQ=255)
                                                                     gTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTgg                                                                                             <  7:256602/135‑1 (MQ=255)
                                                                     gTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTgg                                                                                             >  8:256602/1‑135 (MQ=255)
                                                                      tttGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTc                                                                              <  6:86322/149‑1 (MQ=255)
                                                                         gAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTccc                                                                            <  3:88789/148‑1 (MQ=255)
                                                                            gCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGc                                                                                                     >  8:245621/1‑120 (MQ=255)
                                                                            gCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGc                                                                                                     <  7:245621/120‑1 (MQ=255)
                                                                            gCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCAt                                                                          >  3:230466/1‑147 (MQ=255)
                                                                              ccATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATcag                                                                       >  6:66481/1‑148 (MQ=255)
                                                                              ccATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATcag                                                                       >  8:98638/1‑148 (MQ=255)
                                                                                   cccTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGAcc                                                                 <  5:66481/149‑1 (MQ=255)
                                                                                    ccTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCg                                                                >  8:301574/1‑149 (MQ=255)
                                                                                      tCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGAc                                                                  <  5:351954/145‑1 (MQ=255)
                                                                                      tCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGAc                                                                  >  6:351954/1‑145 (MQ=255)
                                                                                          tACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACgg                                                         <  8:28077/149‑1 (MQ=255)
                                                                                          tACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACgg                                                         <  8:23029/149‑1 (MQ=255)
                                                                                             cGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACgg                                                         >  6:63662/1‑147 (MQ=255)
                                                                                             cGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGgca                                                       <  7:98638/149‑1 (MQ=255)
                                                                                               aaCTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGgcagc                                                     <  1:35631/149‑1 (MQ=255)
                                                                                                aCTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGgcagca                                                    <  1:90074/149‑1 (MQ=255)
                                                                                                  ttGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGaagaccttcaccgtcaagttcggtatcgagggtatgggcctcaaacctgcgggtgaccaaaccccgcacaccgggcaccaccatctgctggtggatgt                                                  <  4:141126‑M2/149‑99 (MQ=255)
                                                                                                       ggTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGaagaccttcaccgtcaagttcggtatcgagggtatgggcctcaaacctgcgggtgaccaaaccccgcacaccgggcaccaccatctgctggtggatgtcgac                                              <  5:118350‑M2/148‑103 (MQ=255)
                                                                                                        gTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTATGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGaaaa                                            <  4:40894/149‑1 (MQ=255)
                                                                                                         tGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGaagaccttcaccgtcaagttcggtatcgagggtatgggcctcaaacctgcgggtgaccaaaccccgcacaccgggcaccaccatctgctggtggatgtcgaca                                             <  8:36129‑M2/147‑104 (MQ=255)
                                                                                                           aaGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATa                                          <  3:199786/148‑1 (MQ=255)
                                                                                                           aaGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAg                                         <  3:253027/149‑1 (MQ=255)
                                                                                                           aaGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAg                                         <  5:240709/149‑1 (MQ=255)
                                                                                                                     cGACCGTGGCACCATCGGCGGGGGAAACGATGAAGCCCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTg                                     >  6:245532/1‑143 (MQ=255)
                                                                                                                     cGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTg                                     <  5:245532/143‑1 (MQ=255)
                                                                                                                      gACCGTGGCACCATCGGCGGGTGAAACGATGaagaccttcaccgtcaagttcggtatcgagggtatgggcctcaaacctgcgggtgaccaaaccccgcacaccgggcaccaccatctgctggtggatgtcgacaaagagccggtggct                               >  6:118350‑M2/1‑31 (MQ=255)
                                                                                                                      gACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGttcatt                               <  5:313363/148‑1 (MQ=255)
                                                                                                                      gACCGTGGCACCATCGGCGGGGGAAACGATGAAGACATTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGttcatt                               <  5:69368/148‑1 (MQ=255)
                                                                                                                       aCCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGttcattca                             <  5:63662/149‑1 (MQ=255)
                                                                                                                         cGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACt                           >  7:63669/1‑149 (MQ=255)
                                                                                                                              cagcATCGGCGGGGGAAACGATGAAGAGCTTGGCCTGAGTGGGCGGCTCATGGGTCTTCAGGGCGTATGCGTCACTGGCGAACACCGAGGCTCGCATCAGCAGACCTGCTACGTCAGCAGGGGAAAATAGGATTTTGATTCACTtctca                      <  2:116167/146‑2 (MQ=255)
                                                                                                                                 cATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCtgt                   >  8:226602/1‑149 (MQ=255)
                                                                                                                                  aTCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCtgtg                  <  7:301574/149‑1 (MQ=255)
                                                                                                                                        gggggAAACGATGaagaccttcaccgtcaagttcggtatcgagggtatgggcctcaaacctgcgggtgaccaaaccccgcacaccgggcaccaccatctgctggtggatgtcgacaaagagccggtggctgacatgccgctgccgacca            >  3:141126‑M2/1‑13 (MQ=255)
                                                                                                                                         ggggAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAATGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCTGTGGTTCACt           <  8:76719/149‑1 (MQ=255)
                                                                                                                                              aaCGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCTGTGGTTCACTTAtt       >  1:281142/1‑148 (MQ=255)
                                                                                                                                                    gAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCTGTGGTTCACTTATTGACCg  >  1:69790/1‑147 (MQ=255)
                                                                                                                                                    gAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCTGTGGTTCACTTATTGACCg  >  2:155518/1‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CCACCGGCTCTTTGTCGACATCCACCAGCAGATGGTGGTGCCCGGTGTGCGGGGTTTGGTCACCCGCAGGTTTGAGGCCCATACCCTCGATACCGAACTTGACGGTGAAGGTCTTGTCGACCGTGGCACCATCGGCGGGGGAAACGATGAAGACCTTCGCCTCCTTGGGCGGCTCCTGGCTCTTCAGGGCGTCTGCGGCACTGGCGAACACCGACGCTCCCATCAGCAGACCGGCAACGGCAGCACGCGAAAATAGGCTGTTCATTCACTTCTCCTGTGGTTCACTTATTGACCG  >  NC_002947/5882929‑5883223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.