| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5908269 | 55 (1.020) | 8 (0.160) | 5/246 | NT | 14.2% | coding (952/1098 nt) | spuD | spermidine/putrescine ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 5908285 | 45 (0.880) | coding (936/1098 nt) | spuD | spermidine/putrescine ABC transporter substrate‑binding protein | |||||
TCGGGCTTACTTGCCCGACTTGATCTTCGTCCAGCTGCGGGTGATCACTCGCTGCACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5908117‑5908269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacggTAACGCTGCTGCCACCCCGTTCGTGGACAAAGACATCACCAGCGACCCAAGCATCTATCCGCCTGCCGAAGTGAAGAAGCAGCTGTACGCGATCGCTGCGCCTGACGCTTCTGTGCAGCGAGTGATCACCCGCAGCTGGACGA < NC_002947/5908285‑5908143 TCGGGCTTACTTGCCCGACTTGATCTTCGTCCAGCTGCGGGAGATCACTCGCTGCACTGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGA < 2:299123/149‑1TCGGGCTATCTTGCCCGACTTGATCTTCGTCCAGCTGCGGGTGATCACTCGCTGCACAGAAGCTTAAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGA < 2:304190/149‑1 CGTCCAGCTGCGGGTGATCACTCGCTGCACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTC < 8:123636/148‑1 CAGCTGCGGGTGATCACTCGCTGCACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTGG < 8:189584/148‑1 CACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTcg > 5:37058/1‑123 CACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTGG < 6:37058/125‑1 CACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTGG > 7:193841/1‑125 CACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTGG < 8:193841/125‑1 CGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTG < 7:11572/104‑1 CGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGGTAACGCTGCTGCCACCCCGTTCGTG > 8:11572/1‑104 GAACGGTAACGCTGCTGCCACCCCGTTCGTGGACAAAGACATCACCAGCGACCCAAGCATCTATCCGCCTGCCGAAGTGAAGAAGCAGCTGTACGCGATCGCTGCGCCTGACGCTTCTGTGCAGCGAGTGATCACCCGCAGCTGGACGA < 3:16190/149‑1 GGTAACGCTGCTGCCACCCCGTTCGTGGACAAAGACATCACCAGCGACCCAAGCATCTATCCGCCTGCCGAAGTGAAGAAGCAGCTGTACGCGATCGCTGCGCCTGACGCTTCTGTGCAGCGAGTGATCACCCGCAGCTGGACG > 7:97183/1‑144 TCGGGCTTACTTGCCCGACTTGATCTTCGTCCAGCTGCGGGTGATCACTCGCTGCACAGAAGCGTCAGGCGCAGCGATCGCGTACAGCTGCTTCTTCACTTCGGCAGGCGGATAGATGCTTGGGTCGCTGGTGATGTCTTTGTCCACGAACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5908117‑5908269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacggTAACGCTGCTGCCACCCCGTTCGTGGACAAAGACATCACCAGCGACCCAAGCATCTATCCGCCTGCCGAAGTGAAGAAGCAGCTGTACGCGATCGCTGCGCCTGACGCTTCTGTGCAGCGAGTGATCACCCGCAGCTGGACGA < NC_002947/5908285‑5908143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |